| Gene: Chd5 | ID: uc008wai.1_intron_13_0_chr4_151741583_f | SPECIES: mm9 |
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(7) OTHER.mut |
(3) OVARY |
(2) PIWI.ip |
(23) TESTES |
| TGGGGAAGACAGTACAGACCATTGTGTTTCTCTATTCTCTGTACAAGGAGGTGGGCAGACAGGAGGGCAAGCGGGGCTGGGCGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGGGGGTTCTGAGAGGGCGGGGTTCTGAGAAGGCGGGGCCTGTACAGGTGGGGTCTGGGTGGGCGGGGTCTGGGCAGATGGGGTCTGAGCAGGCGAGGTCTGGGCGGGCAGGGTTCTGAGAGGGTGGGGGCTGGGCAGATGGGGGCTGGATAGGCAGGGGCTGGGTGGACGGGGGCTGGTGCCATCCACTGGCAGCCAGCTTCACCACCTCAGGTTCTCTCTGCAGGGCCACTCCAAGGGGCCTTACCTGGTCAGCGCGCCCCTGTCCACCATCAT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR037897(GSM510433) ovary_rep2. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................AAGCGGGGCTGGGCGcgc................................................................................................................................................................................................................................................................................................................................................................................. | 18 | cgc | 119.00 | 27.50 | 32.50 | 23.00 | 40.00 | 2.50 | 4.50 | 2.50 | - | 1.00 | 2.00 | 3.00 | 1.00 | 0.50 | - | 1.50 | 1.00 | 1.00 | 1.00 | - | - | 0.50 | - | - | 0.50 | 0.50 | 0.50 | - |
| ....................................................................AAGCGGGGCTGGGCGc................................................................................................................................................................................................................................................................................................................................................................................... | 16 | c | 118.50 | 27.50 | 22.00 | 39.00 | 17.00 | 9.50 | - | 6.50 | 13.00 | 3.50 | - | 0.50 | 2.00 | 2.50 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCGcgcg................................................................................................................................................................................................................................................................................................................................................................................ | 19 | cgcg | 93.00 | 27.50 | 45.00 | 5.50 | 14.00 | 2.50 | 13.00 | 6.00 | - | 0.50 | 1.50 | 3.00 | - | - | - | - | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 |
| ....................................................................AAGCGGGGCTGGGCGcg.................................................................................................................................................................................................................................................................................................................................................................................. | 17 | cg | 69.00 | 27.50 | 25.00 | 11.50 | 7.00 | 9.50 | 3.00 | 3.50 | - | 2.50 | 4.50 | - | 1.00 | - | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCG.................................................................................................................................................................................................................................................................................................................................................................................... | 15 | 2 | 27.50 | 27.50 | 10.50 | 7.50 | 0.50 | 4.50 | - | - | - | 3.00 | - | 1.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCGtgcg................................................................................................................................................................................................................................................................................................................................................................................ | 19 | tgcg | 2.00 | 27.50 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCGG................................................................................................................................................................................................................................................................................................................................................................................... | 16 | 2 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................CAAGCGGGGCTGGGCGcgc................................................................................................................................................................................................................................................................................................................................................................................. | 19 | cgc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGAGAAGGCGGGGCCTta......................................................................................................................................................................................................................................... | 18 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................................GGGGCTGGGCGGGCGccg............................................................................................................................................................................................................................................................................................................................................................................. | 18 | ccg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCGcgt................................................................................................................................................................................................................................................................................................................................................................................. | 18 | cgt | 1.00 | 27.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| .......................................................................CGGGGCTGGGCGGGCGG............................................................................................................................................................................................................................................................................................................................................................................... | 17 | 2 | 1.00 | 1.00 | - | - | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................CAGCTTCACCACCTCAGGTTCTCTCTG..................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................GCGGGGCTGGGCGGGCGccg............................................................................................................................................................................................................................................................................................................................................................................. | 20 | ccg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGGGGCCTTACCTGGTCAGC.................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................CAGCTTCACCACCTCAGGTTCTCTCTa..................................................... | 27 | a | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGagcg.................................................................................................................................................................................................................................................................................................................................................................................. | 17 | agcg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................CAGCTTCACCACCTCAGGTTCTCTCT...................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCGagc................................................................................................................................................................................................................................................................................................................................................................................. | 18 | agc | 0.50 | 27.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCGcgta................................................................................................................................................................................................................................................................................................................................................................................ | 19 | cgta | 0.50 | 27.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCGca.................................................................................................................................................................................................................................................................................................................................................................................. | 17 | ca | 0.50 | 27.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCGaaa................................................................................................................................................................................................................................................................................................................................................................................. | 18 | aaa | 0.50 | 27.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGCGGGGCTGGGCGcac................................................................................................................................................................................................................................................................................................................................................................................. | 18 | cac | 0.50 | 27.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................CAGGGGCTGGGTGGAC.......................................................................................................... | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................GTGGGGGCTGGGCAGA......................................................................................................................................... | 16 | 17 | 0.06 | 0.06 | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGGGAAGACAGTACAGACCATTGTGTTTCTCTATTCTCTGTACAAGGAGGTGGGCAGACAGGAGGGCAAGCGGGGCTGGGCGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGCGGGGTTCTGAGAGGGGGGGTTCTGAGAGGGCGGGGTTCTGAGAAGGCGGGGCCTGTACAGGTGGGGTCTGGGTGGGCGGGGTCTGGGCAGATGGGGTCTGAGCAGGCGAGGTCTGGGCGGGCAGGGTTCTGAGAGGGTGGGGGCTGGGCAGATGGGGGCTGGATAGGCAGGGGCTGGGTGGACGGGGGCTGGTGCCATCCACTGGCAGCCAGCTTCACCACCTCAGGTTCTCTCTGCAGGGCCACTCCAAGGGGCCTTACCTGGTCAGCGCGCCCCTGTCCACCATCAT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR037897(GSM510433) ovary_rep2. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......GACAGTACAGACCATTGTGTTTCTCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |