| Gene: mKIAA0720 | ID: uc008vzg.1_intron_18_0_chr4_151486548_f | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| GCAGCCAGGCCTTGTGCCGGAGCTGGGTGGACACTATTTACAACGCACAGGTGAGGGCAGAGTGACACAGGGGTCTGGGGCAGATGGGCTCTGTTGCTTGTGGCTCACTCTGTGCCCGCTCAACCTGCAGAACCAGCTGCAGCAGCTGCGTGCACAGCTCAGTGCACAGGAGCACCCAGG ........................................................(((.((..((...((((((((.......))))))))))..)))))............................................................................... ..................................................51..................................................103........................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGGGCAGAGTGACACAGGGGTCT........................................................................................................ | 26 | 1 | 4.00 | 4.00 | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................TGGGCTCTGTTGCgc................................................................................. | 15 | gc | 3.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGa........................................................................................................... | 23 | a | 2.00 | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGG........................................................................................................... | 23 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................GGGTCTGGGGCAGATGGGCTCTGTTGC................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGGTCTa....................................................................................................... | 27 | a | 2.00 | 4.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGGTCTGt...................................................................................................... | 28 | t | 2.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................TGGGCTCTGTTGCgca................................................................................ | 16 | gca | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGGTCTGG...................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................AGATGGGCTCTGTTGC................................................................................... | 16 | 3 | 1.33 | 1.33 | 0.67 | - | - | - | - | - | - | - | - | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGGGCAGAGTGACACAGGGGTCTG....................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAG.............................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................CAGTGCACAGGAGCAaaga.. | 19 | aaga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGGTCTaatt.................................................................................................... | 30 | aatt | 1.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGGTC......................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................................................................AGGGGTCTGGGGCAGATGGGCTC......................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGGTCTGGGGC................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................TCTGTTGCTTGTGGCTCACT....................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TGACACAGGGGTCTGGGGCAGATGGGCT.......................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................TCTGTTGCTTGTGGCTCACTCTGTGC................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................AGTGACACAGGGGTCTGGGGCAGAT............................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........TTGTGCCGGAGCTGGGTGGACAC.................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGatc......................................................................................................... | 25 | atc | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............GTGCCGGAGCTGGGTGGACACTA................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGG............................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGGTtt........................................................................................................ | 26 | tt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................GGTCTGGGGCAGATGGGCTCT........................................................................................ | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCAGAGTGACACAGGGGTCTG....................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGGGCAGAGTGACACAGG............................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................TCTGGGGCAGATGGGCT.......................................................................................... | 17 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCAGCCAGGCCTTGTGCCGGAGCTGGGTGGACACTATTTACAACGCACAGGTGAGGGCAGAGTGACACAGGGGTCTGGGGCAGATGGGCTCTGTTGCTTGTGGCTCACTCTGTGCCCGCTCAACCTGCAGAACCAGCTGCAGCAGCTGCGTGCACAGCTCAGTGCACAGGAGCACCCAGG ........................................................(((.((..((...((((((((.......))))))))))..)))))............................................................................... ..................................................51..................................................103........................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
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| ...................................................................................................GCTCACTCTGTGCCCGtga.............................................................. | 19 | tga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |