| Gene: Thap3 | ID: uc008vyu.1_intron_2_0_chr4_151359971_r.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| CAATGCTGCAACCGCTACAGCAGCCGCAGGAAGCAGCTCACCTTCCACCGGTGAGGGATGGGGAAGCCGGGACCCGACCCTACGGAACGCTCGCGGGTCTCGGTGCACTGGGCGGGAGCTCCGGGAGGCCCAGGCCAGGGTTTGCAGGCGAGGTGGACCGGGACTGCGTAGAGGGGCCGGGCCGGGCGCGGGCGATGCTCCTGCGCGCGGCCTCACAGCCTGACCCCGCCGCCCCCTCCTCGCCTGGAAG ...............................................................................(((((...((....)).((((((((.((((((((....)).)).....((((((((....)))))..)))..)))).))))))))..)))))............................................................................... ...........................................................................76.............................................................................................171............................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037896(GSM510432) ovary_rep1. (ovary) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT1() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................TACGGAACGCTCGCGGGTCTCGGTGC................................................................................................................................................ | 26 | 1 | 18.00 | 18.00 | 5.00 | 2.00 | 1.00 | 2.00 | 1.00 | 2.00 | - | 2.00 | 1.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................TACGGAACGCTCGCGGGTCTCGGTG................................................................................................................................................. | 25 | 1 | 7.00 | 7.00 | 2.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............TACAGCAGCCGCAGGAAGCAGCTCAC................................................................................................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............TACAGCAGCCGCAGGAAGCAGCTCACC................................................................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................GGAACGCTCGCGGGTCTCGGTGCAC.............................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................CGGGAGCTCCGGGAGtcga....................................................................................................................... | 19 | tcga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................AGGTGGACCGGGACTGC................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................TACGGAACGCTCGCGGGTCTCGGTGCA............................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AGGCGAGGTGGACCGGGACTGCG.................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......TGCAACCGCTACAGCAGCCGCAGGAAGCAG...................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TGCAGGCGAGGTGGACCGGGACTGC................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TTGCAGGCGAGGTGGACCGGGACTGCGTA................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................GCGGGAGCTCCGGGgaga......................................................................................................................... | 18 | gaga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................CGGAACGCTCGCGGGTCTCGGTGCAC.............................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................TCCACCGGTGAGGGATGGGGAAGCCGGG................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................GCGAGGTGGACCGGGACTGCGTAG............................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......GCAACCGCTACAGCAGCCGC............................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TGCAACCGCTACAGCAGCCGCAGGAAGC........................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................ACGGAACGCTCGCGGGTCTCGGTGC................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................CGCAGGAAGCAGCTCAact............................................................................................................................................................................................................... | 19 | act | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................GCGAGGTGGACCGGGA....................................................................................... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............TACAGCAGCCGCAGGAAGCAGCTCAtc................................................................................................................................................................................................................ | 27 | tc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGGACCGGGACTGCGTAGAGGGGCC........................................................................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................CAGGCGAGGTGGACCagaa....................................................................................... | 19 | agaa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................CGGGAGGCCCAGGCCAGGGTTTGCAGGa..................................................................................................... | 28 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................GGCGGGAGCTCCGGGga........................................................................................................................... | 17 | ga | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................ACAGCAGCCGCAGGAAG......................................................................................................................................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| CAATGCTGCAACCGCTACAGCAGCCGCAGGAAGCAGCTCACCTTCCACCGGTGAGGGATGGGGAAGCCGGGACCCGACCCTACGGAACGCTCGCGGGTCTCGGTGCACTGGGCGGGAGCTCCGGGAGGCCCAGGCCAGGGTTTGCAGGCGAGGTGGACCGGGACTGCGTAGAGGGGCCGGGCCGGGCGCGGGCGATGCTCCTGCGCGCGGCCTCACAGCCTGACCCCGCCGCCCCCTCCTCGCCTGGAAG ...............................................................................(((((...((....)).((((((((.((((((((....)).)).....((((((((....)))))..)))..)))).))))))))..)))))............................................................................... ...........................................................................76.............................................................................................171............................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037896(GSM510432) ovary_rep1. (ovary) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT1() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................GTTTGCAGGCGAGGTGGgtcc.............................................................................................. | 21 | gtcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................GGGAAGCCGGGACtggg................................................................................................................................................................................. | 17 | tggg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................GCCGGGACCCGAgga............................................................................................................................................................................. | 15 | gga | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................CTCACAGCCTGACCC........................ | 15 | 14 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.07 |