| Gene: Spsb1 | ID: uc008vxg.1_intron_1_0_chr4_149281367_r.5p | SPECIES: mm9 |
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(9) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(20) TESTES |
| GGGCACCGCGAGCCTCCGGAGCTCCAAGAGCTGCGGCCTCTCTGTGCGCGGTAGGCGGCATGGGACACCGAAGACCGGTTGGGTGGGCGCGCGTTCGGGCTCTGGGATCCGGGGATGGGGGAGACACGGGGACCACCACGCTGAGAGAACTGAGAGGGTGGGCGCGGGGCAGAGCGTGGGCATAGGGTGGGCACCCGGCGTGGAGCCATGATCGATCTTGGGTCCCCGGAGAGGGGCCGGGCGCCGCCCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesWT4() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................GGTGGGCGCGGGGCAtgac........................................................................... | 19 | tgac | 36.00 | 0.00 | 17.00 | 12.00 | - | - | 3.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................CGCTGAGAGAACTGAGAGGGTGGGC....................................................................................... | 25 | 1 | 11.00 | 11.00 | - | - | - | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGAGAGAACTGAGAGGGTGGGCGC..................................................................................... | 24 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................GGTGGGCGCGGGGCAtga............................................................................ | 18 | tga | 4.00 | 0.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GGTGGGCGCGGGGCAGgact.......................................................................... | 20 | gact | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................AGGGTGGGCACCCGGCGTGGAGCCATGATC..................................... | 30 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GGTGGGCGCGGGGCAtgat........................................................................... | 19 | tgat | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGAGAGAACTGAGAGGGTGGGCGCGa................................................................................... | 26 | a | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GTGGAGCCATGATCGATC................................. | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CTCTGGGATCCGGGGATGG.................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GGTGGGCGCGGGGCAtgc............................................................................ | 18 | tgc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................ACCGGTTGGGTGGGCGCGCGT............................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................................ATCGATCTTGGGTCCCCG...................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................................CACCACGCTGAGAGAACTGAGAGGG............................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGAGAGAACTGAGAGGGTGGGC....................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................ACCACGCTGAGAGAACTGAGAGGG............................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GGTGGGCGCGGGGCAtgg............................................................................ | 18 | tgg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GGTGGGCGCGGGGCAtgaa........................................................................... | 19 | tgaa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................ACACGGGGACCACCACGCTGAGAGAACT................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................GGGCGCGGGGCAGAGCG.......................................................................... | 17 | 3 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.67 |
| GGGCACCGCGAGCCTCCGGAGCTCCAAGAGCTGCGGCCTCTCTGTGCGCGGTAGGCGGCATGGGACACCGAAGACCGGTTGGGTGGGCGCGCGTTCGGGCTCTGGGATCCGGGGATGGGGGAGACACGGGGACCACCACGCTGAGAGAACTGAGAGGGTGGGCGCGGGGCAGAGCGTGGGCATAGGGTGGGCACCCGGCGTGGAGCCATGATCGATCTTGGGTCCCCGGAGAGGGGCCGGGCGCCGCCCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesWT4() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................GGGGCCGGGCGCCGgtcc.... | 18 | gtcc | 22.00 | 0.00 | 1.00 | - | 13.00 | - | 3.00 | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................................................................................GGGGCCGGGCGCCGgtc.... | 17 | gtc | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - |
| ....................................................................................................................................................................................................................................GGGGCCGGGCGCCGgtac.... | 18 | gtac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................GGTGGGCGCGGGGCAgga............................................................................... | 18 | gga | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |