| Gene: D4Ertd429e | ID: uc008vwz.1_intron_1_0_chr4_149092267_r | SPECIES: mm9 |
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(1) OTHER.ip |
(4) OTHER.mut |
(7) PIWI.ip |
(3) PIWI.mut |
(1) TDRD1.ip |
(27) TESTES |
| TCCCCAGCTGCCACAGAGGAATCACACTCGGGACACAAAGCACACCATGGGTATGTGTGGGGCTGAAGCACGCAGTAGGTACTGCCATGGGAGCTCTTGGCCCATCTTGGAGGTCATTTGGTACTGTGGTAGGAACGTACTCCTCAGCACTAGACTGGTGGATAGCTGTATCCTTTCAGAGCCTGGAAACCTGTGGGGCATTGTCAGCCTGTACATCATGGATGCTCTCGTTTTGCCCGCACCCTTCTACACTGACAAGCGTTTTTAAAAGTTAGTTGGACTCTGTTAAAACTCAGACTTTCACATGGGGTGTGTGGCTCTCTGCTCTGGGCTGTAAGTGTGCGTAGATTTGGCCACACGGGCTCAGTGATGCTCGCTGCCCAGAGGACATGCTGGTACCGCTCAGTGCTCATTTGCTGCCCTGACCCTGTGCCGCTCCGAGAGGTGAGCAGTGTGACCTTGTCCAGGGCCTGGAGCAGAGCTGCAGGGAAGCCCGTGGGGTCGAGCTGCAGCACAGCAGGATGCTCACTCTTCTGTCCACAGAGATGAGGTCGATGCTGGCCAGAGACAGCGCCCGCAGTAGCCACTCCATC ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................((((((((...(((((....((((((((((.(((...))).)))....)))).))))))))..((((......))))..))))))))...(((....))).................................................. ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................444................................................................................................543................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................................................................................................................................................................TCTGCTCTGGGCTGTAAGTGTGCGTA....................................................................................................................................................................................................................................................... | 26 | 1 | 19.00 | 19.00 | 9.00 | 4.00 | 1.00 | 2.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................TCTGCTCTGGGCTGTAAGTGTGCGT........................................................................................................................................................................................................................................................ | 25 | 1 | 16.00 | 16.00 | 1.00 | 4.00 | 4.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................TCACACTCGGGACACAAAGCACACCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 11.00 | 11.00 | 4.00 | - | 3.00 | - | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CACACTCGGGACACAAAGCACACCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 9.00 | 9.00 | 1.00 | 2.00 | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................TGGGCTGTAAGTGTGCGTAGATTTGGCC.............................................................................................................................................................................................................................................. | 28 | 1 | 6.00 | 6.00 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................TCACACTCGGGACACAAAGCACACCATGGa.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 30 | a | 3.00 | 0.00 | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................TGGGCTGTAAGTGTGCGTAGATTTGG................................................................................................................................................................................................................................................ | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TGCTCTGGGCTGTAAGTGTGCGTAGAT.................................................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................TGATGCTCGCTGCCCAGAGGACATGCTG...................................................................................................................................................................................................... | 28 | 1 | 3.00 | 3.00 | 1.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TGTGTGGGGCTGAAGCACGCAGTAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCACAGAGATGAGGTCGATGC................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTATGTGTGGGGCTGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 18 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................TGGGCTGTAAGTGTGCGTAGATTTGGC............................................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................GGACATGCTGGTACCGCTCAGTGCTC...................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGTCGATGCTGGCCAGAGACAGCGC................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............GAGGAATCACACTCGGGACACAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................ACACTCGGGACACAAAGCACACCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TGCTCTGGGCTGTAAGTGTGCGTAGA..................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TGCTCTGGGCTGTAAGTGTGCGTAG...................................................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................TGACAAGCGTTTTTAAAAGTTAGTTGG.......................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TGCTCTGGGCTGTAAGTGTGCGTAGATT................................................................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCGCCCGCAGTAGCCACTCCATC | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TGCTCTGGGCTGTAAGTGTGCGTAGATTT.................................................................................................................................................................................................................................................. | 29 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGGGCCTGGAGCAGAGCTGCA........................................................................................................... | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................TCTGCTCTGGGCTGTAAGTGTGCGTt....................................................................................................................................................................................................................................................... | 26 | t | 2.00 | 16.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................TGGGCTGTAAGTGTGCGTAGATTTGGCCA............................................................................................................................................................................................................................................. | 29 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................TCGGGACACAAAGCACACCATGGagat........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | agat | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTCAGAGCCTGGAAACCTGTGG............................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................TAAAAGTTAGTTGGACTCTGTTAAAACTC........................................................................................................................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TCACACTCGGGACACAAAGCACACCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................TCTGGGCTGTAAGTGTGCGTAGATTT.................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CACACTCGGGACACAAAGCACACCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................ACACTCGGGACACAAAGCACACCATGGa.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | a | 2.00 | 0.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TGCTCTGGGCTGTAAGTGTGCGTAGAaa................................................................................................................................................................................................................................................... | 28 | aa | 1.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTATGTGTGGGGCTGAAGCACGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TGGGTATGTGTGGGGCTGAAGCACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................GAGGACATGCTGGTACCGCTCAGTGCT....................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CACACTCGGGACACAAAGCACACCATGGa.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 29 | a | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................TGTGGCTCTCTGCTCTGGGCTGTAAGT.............................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................TCTGCTCTGGGCTGTAAGTGTGCGTAt...................................................................................................................................................................................................................................................... | 27 | t | 1.00 | 19.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................TACACTGACAAGCGTTTTTAAAAGTTAGTT............................................................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................TCTGCTCTGGGCTGTAAGTGTGC.......................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................CCATGGGTATGTGTGGGGCTGAAGCACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................TGATGCTCGCTGCCCAGAGGACATGCT....................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TGCTCTGGGCTGTAAGTGTGCGTA....................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGGGCCTGGAGCAGAGCTGCcg.......................................................................................................... | 27 | cg | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TTGGAGGTCATTTGGTACTGTGGTAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................AAAGTTAGTTGGACTCTGTTAAAACTCA.......................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CACAGAGGAATCACACTCGGGACACAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................TAAGTGTGCGTAGATTTGGCCACACGGGCTC.................................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................................................................................................................................................................................TAAAACTCAGACTTTCACATGGGGTGT........................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGGGCCTGGAGCAGAGCTGC............................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................ATCACACTCGGGACACAAAGCACACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................GGGCTGTAAGTGTGCGTAGATTTGtcc.............................................................................................................................................................................................................................................. | 27 | tcc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................CTGGGCTGTAAGTGTGCGTAGATTTG................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGGGCCTGGAGCAGAGCTGCAa.......................................................................................................... | 27 | a | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAGTGTGACCTTGTCCAGGGCCTG........................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCCAGGGCCTGGAGCAGAGCTGC............................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................TCGGGACACAAAGCACACCATGGGTAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGTCGATGCTGGCCAGAGACAGC..................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................AAGTTAGTTGGACTCTGTTAAAACTCt.......................................................................................................................................................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................TCTCTGCTCTGGGCTGTAAGTGTGCGT........................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................TCTGGGCTGTAAGTGcgc.......................................................................................................................................................................................................................................................... | 18 | cgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................TAAAAGTTAGTTGGACTCTGTTAAAACT............................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTGCCCTGACCCTGTGCCGC............................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTTCAGAGCCTGGAAACCTGTGGGGCAT........................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TGGGGCTGAAGCACGCAGTAGGTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CACACTCGGGACACAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................TGTAAGTGTGCGTAGATTTGGCCACA........................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTATGTGTGGGGCTGAAGCACGCAGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............GAGGAATCACACTCGGGACACAAAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................GGAATCACACTCGGGACACAAAGCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................AGAGGACATGCTGGTACCGCTCAGT.......................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................CTCTCTGCTCTGGGCTGTAAGTGTGCG......................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CACACTCGGGACACAAAGCACACCATGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................TGGTACCGCTCAGTGCTCATTTGCTGC............................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCACAGAGATGAGGTCGATGCTGGCCAGAGA......................... | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................GGCTGTAAGTGTGCGTAGATTTGGCC.............................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................TCTGGGCTGTAAGTGTGCGTAGATTTt................................................................................................................................................................................................................................................. | 27 | t | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................TGTTAAAACTCAGACTTTCACATGGGGT.......................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGACAGCGCCCGCAGTAGCCACTC.... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCTGCAGCACAGCAGGATGCTCAC................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TGCTCTGGGCTGTAAGTGTGCGTAGt..................................................................................................................................................................................................................................................... | 26 | t | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................TAAAACTCAGACTTTCACATGGGGTG......................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................TTTAAAAGTTAGTTGGACTCTGTTAAAA.............................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................CACTCGGGACACAAAGCACACCATGGag............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | ag | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................TTCTACACTGACAAGCGTTTTTAAAAGT................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTGCTGCCCTGACCCTGTGCCG.............................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CACACTCGGGACACAAAGCACACaatg................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | aatg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................GCTGTAAGTGTGCGTAGATTTGGCCA............................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................TCTGCTCTGGGCTGTAAGTGTGCG......................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................CCTGGAAACCTGTGGGGCATTGTCAGCCT............................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TCACACTCGGGACAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 15 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| TCCCCAGCTGCCACAGAGGAATCACACTCGGGACACAAAGCACACCATGGGTATGTGTGGGGCTGAAGCACGCAGTAGGTACTGCCATGGGAGCTCTTGGCCCATCTTGGAGGTCATTTGGTACTGTGGTAGGAACGTACTCCTCAGCACTAGACTGGTGGATAGCTGTATCCTTTCAGAGCCTGGAAACCTGTGGGGCATTGTCAGCCTGTACATCATGGATGCTCTCGTTTTGCCCGCACCCTTCTACACTGACAAGCGTTTTTAAAAGTTAGTTGGACTCTGTTAAAACTCAGACTTTCACATGGGGTGTGTGGCTCTCTGCTCTGGGCTGTAAGTGTGCGTAGATTTGGCCACACGGGCTCAGTGATGCTCGCTGCCCAGAGGACATGCTGGTACCGCTCAGTGCTCATTTGCTGCCCTGACCCTGTGCCGCTCCGAGAGGTGAGCAGTGTGACCTTGTCCAGGGCCTGGAGCAGAGCTGCAGGGAAGCCCGTGGGGTCGAGCTGCAGCACAGCAGGATGCTCACTCTTCTGTCCACAGAGATGAGGTCGATGCTGGCCAGAGACAGCGCCCGCAGTAGCCACTCCATC ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................((((((((...(((((....((((((((((.(((...))).)))....)))).))))))))..((((......))))..))))))))...(((....))).................................................. ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................444................................................................................................543................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCACTCTTCTGTCCACAGAGATGA............................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |