| Gene: Pik3cd | ID: uc008vws.1_intron_11_0_chr4_149029613_r | SPECIES: mm9 |
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(1) OTHER.mut |
(5) TESTES |
| TCCTGGAGCTGGGGCGTCACGGGGAGCGTGGGCGCATCACGGAGGAGGAGGTGAGCTCCGGTCTTGGAATGGGGGAGCTGGGATTGGGCGTGGAGCTTGGAGGCCTCACCCTGTCTGCGCCCCTCAGCAGCTGCAGCTGCGGGAGATCCTGGAACGGCGGGGATCCGGGGAACTGTA ........................................................((((....)))).((((((.((..(((.((((.(((..(((....)))..))))))))))..))))))))................................................... ..................................................51..........................................................................127................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................TCACCCTGTCTGCGCCCCTCAGt................................................. | 23 | t | 2.00 | 0.00 | - | 2.00 | - | - | - |
| ..................................................GTGAGCTCCGGTCTTGGAATGGGGG...................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - |
| ..................................................GTGAGCTCCGGTCTTGGAATGGGG....................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - |
| ............................................................................GCTGGGATTGGGCGTGGA................................................................................... | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - |
| TCCTGGAGCTGGGGCGTCACGGGGAGCGTGGGCGCATCACGGAGGAGGAGGTGAGCTCCGGTCTTGGAATGGGGGAGCTGGGATTGGGCGTGGAGCTTGGAGGCCTCACCCTGTCTGCGCCCCTCAGCAGCTGCAGCTGCGGGAGATCCTGGAACGGCGGGGATCCGGGGAACTGTA ........................................................((((....)))).((((((.((..(((.((((.(((..(((....)))..))))))))))..))))))))................................................... ..................................................51..........................................................................127................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................TCTGCGCCCCTCAGCAgg................................................ | 18 | gg | 1.00 | 0.00 | - | - | - | 1.00 | - |
| ..............CGTCACGGGGAGCGTGGGC................................................................................................................................................ | 19 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 |