| Gene: Kif1b | ID: uc008vvy.1_intron_35_0_chr4_148636388_r | SPECIES: mm9 |
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(6) OTHER.mut |
(4) PIWI.ip |
(1) TDRD1.ip |
(23) TESTES |
| GCTCTGAGCCCAGCCGACATCAACTACGATGAAACTTTGAGCACACTGAGGTACTCTCCTTTGATCTCAGGAGCTGAGTAGTTTTGTATGCCATAGATTTTCTAACACTGTGAGGGGTGTCGTGTGTGTCATAATAAGGGGAAAATGGTTTCTGCTTTAATGGAATTTACTTATGTGGCTTTCAGTTTCATTGGGATAAATGAGAGGGTATTTTTTTGTTTTTGTAATAGGCTGACAAACTGGGTTTGAACCTCTCTCTGGTATTTATTTCTATTGTGATCTTAGCCAATCACTTAAGTTCTTAGTCTTTGTCACCTCTGTAGGATGCTGTAAAGCTTCATACAAATAATGTATTTGTCAAGGATCTTGAAATGTATAAGTCCTCAGAATGTTTGGTGTAGAGCTCATGGCATGTATGAGAAGCAGAACCTCTGAGAAATGGCAAGAATGCATTTTCTCTCTGTATCTAGATACGCAGATCGTGCAAAACAAATTAAATGCAATGCTGTTATCAATGAGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................................................................................................................................................................................................................GAAATGTATAAGTCCTCAGAATGTTTGGTGTAGAGCTCATGGCATGTATGAG.................................................................................................... | 52 | 1 | 89.00 | 89.00 | 89.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................ATCAACTACGATGAAACTTTGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 24 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATGCAATGCTGTTATCAATGAG. | 26 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - |
| ........................TACGATGAAACTTTGAGCACACTGAGa..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | a | 3.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................CGATGAAACTTTGAGCACACTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................GATGAAACTTTGAGCACACTGAGata................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | ata | 2.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................TACGATGAAACTTTGAGCACACTGAGatac.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 30 | atac | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................TACGATGAAACTTTGAGCACACTGAGata................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | ata | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AACTACGATGAAACTTTGAGCACACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................CAACTACGATGAAACTTTGAGCACACTGt....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................ACTACGATGAAACTTTGAGCACACTGAGata................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 31 | ata | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................ACTACGATGAAACTTTGAtc.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 20 | tc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................AACTACGATGAAACTTTGAGCACACTGAGa..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 30 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TACGATGAAACTTTGAGCACACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TACGATGAAACTTTGAGCACACTGAGaa.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | aa | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................GTAATAGGCTGACAAACTGGG.................................................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................ACTACGATGAAACTTTGAGCACACTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGCAATGCTGTTATCAATGAG. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................GATGAAACTTTGAGCACACTGAGatac.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | atac | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................ACGATGAAACTTTGAGCACACTGAGata................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | ata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TACGATGAAACTTTGAGCACACTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................ACGATGAAACTTTGAGCACACTGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| GCTCTGAGCCCAGCCGACATCAACTACGATGAAACTTTGAGCACACTGAGGTACTCTCCTTTGATCTCAGGAGCTGAGTAGTTTTGTATGCCATAGATTTTCTAACACTGTGAGGGGTGTCGTGTGTGTCATAATAAGGGGAAAATGGTTTCTGCTTTAATGGAATTTACTTATGTGGCTTTCAGTTTCATTGGGATAAATGAGAGGGTATTTTTTTGTTTTTGTAATAGGCTGACAAACTGGGTTTGAACCTCTCTCTGGTATTTATTTCTATTGTGATCTTAGCCAATCACTTAAGTTCTTAGTCTTTGTCACCTCTGTAGGATGCTGTAAAGCTTCATACAAATAATGTATTTGTCAAGGATCTTGAAATGTATAAGTCCTCAGAATGTTTGGTGTAGAGCTCATGGCATGTATGAGAAGCAGAACCTCTGAGAAATGGCAAGAATGCATTTTCTCTCTGTATCTAGATACGCAGATCGTGCAAAACAAATTAAATGCAATGCTGTTATCAATGAGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................GTGGCTTTCAGTTTgtgt............................................................................................................................................................................................................................................................................................................................................ | 18 | gtgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................................................................TCAGTTTCATTGGGcctt..................................................................................................................................................................................................................................................................................................................................... | 18 | cctt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |