| Gene: Fbxo6 | ID: uc008vud.1_intron_1_0_chr4_147520566_r | SPECIES: mm9 |
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(7) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(22) TESTES |
| TGCGAGGAGCTGATGGACACCTTTCGGCCTGACATTGTGGTTAAGGACTGGTAAGTGGTCTCCCCCACAGTGTGGCAAGGGACACCCTAAGAGCCACAGGTCAACCCCACCCCGCTCTGCCTCGTTCCCCTATCAGCCTTTTTCCCCCCAACAGTCGACTCAGATGGACAGTGAGGCCTCCCAATGAGCTAGCTGCCCTGGGCGGGAACTCATGCCTTATGTAGCACCTCCCACCCCTTCCCTCTGATTACCCCATACCGCTTGAATTTATCTCTGTAGTGCTAAGGATGAAGCCCAGGACCGGGACTGGGCTAAGCACACAGTTACAAGCACAGTCCTCATCCAATGTACCATATGGTGACAGGCTTGGACAGTGTCTCTGTAAGAAGCCACTGTGGTTTTTCAAGCTCACAGCCTTCTCTATCCTCCCTAGGGTTGCCCCCAGAGCAGACTGTGGCTGCACCTATCAACTCCGGGTACAGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................AACAGTCGACTCAGAa.............................................................................................................................................................................................................................................................................................................................. | 16 | a | 155.00 | 33.00 | 152.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................AACAGTCGACTCAGA............................................................................................................................................................................................................................................................................................................................... | 15 | 1 | 33.00 | 33.00 | 17.00 | 11.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................AACAGTCGACTCAGAac............................................................................................................................................................................................................................................................................................................................. | 17 | ac | 25.00 | 33.00 | 19.00 | - | - | - | - | 1.00 | 1.00 | - | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................AACAGTCGACTCAGAactg........................................................................................................................................................................................................................................................................................................................... | 19 | actg | 9.00 | 33.00 | 7.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................AACAGTCGACTCAGAact............................................................................................................................................................................................................................................................................................................................ | 18 | act | 5.00 | 33.00 | 4.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................CAGTCGACTCAGAactg........................................................................................................................................................................................................................................................................................................................... | 17 | actg | 3.00 | 0.00 | - | - | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................ACAGTCGACTCAGAac............................................................................................................................................................................................................................................................................................................................. | 16 | ac | 3.00 | 0.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................TTTCGGCCTGACATTGTGGTTAAGGACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................TTGGACAGTGTCTCatgg................................................................................................... | 18 | atgg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TCCCACCCCTTCCgtcg.............................................................................................................................................................................................................................................. | 17 | gtcg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................AGATGGACAGTGAGGgagg............................................................................................................................................................................................................................................................................................................... | 19 | gagg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................AGTCGACTCAGAactg........................................................................................................................................................................................................................................................................................................................... | 16 | actg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................ACAGTCGACTCAGAactg........................................................................................................................................................................................................................................................................................................................... | 18 | actg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................TATCTCTGTAGTGCTAAGGATGAAGC............................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................CAGTCGACTCAGAac............................................................................................................................................................................................................................................................................................................................. | 15 | ac | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGGCAAGGGACACCgggg......................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | gggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| TGCGAGGAGCTGATGGACACCTTTCGGCCTGACATTGTGGTTAAGGACTGGTAAGTGGTCTCCCCCACAGTGTGGCAAGGGACACCCTAAGAGCCACAGGTCAACCCCACCCCGCTCTGCCTCGTTCCCCTATCAGCCTTTTTCCCCCCAACAGTCGACTCAGATGGACAGTGAGGCCTCCCAATGAGCTAGCTGCCCTGGGCGGGAACTCATGCCTTATGTAGCACCTCCCACCCCTTCCCTCTGATTACCCCATACCGCTTGAATTTATCTCTGTAGTGCTAAGGATGAAGCCCAGGACCGGGACTGGGCTAAGCACACAGTTACAAGCACAGTCCTCATCCAATGTACCATATGGTGACAGGCTTGGACAGTGTCTCTGTAAGAAGCCACTGTGGTTTTTCAAGCTCACAGCCTTCTCTATCCTCCCTAGGGTTGCCCCCAGAGCAGACTGTGGCTGCACCTATCAACTCCGGGTACAGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................CTTTTTCCCCCCAACAGTCGACTCAGA............................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TTTTCCCCCCAACAGTCGACTCAGA............................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................................................................TCAGCCTTTTTCCCCCCAACAGTC....................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................CCGCTTGAATTTATCTCTGTAGTGCTAAGGA................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................TACCATATGGTGACAacg........................................................................................................................ | 18 | acg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................GGTTTTTCAAGCTCACAGCCTTCTCTA............................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................GCCTTTTTCCCCCCAACAGTCGACTCA................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................CTCTGATTACCCCATACCGCTTGAA......................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................TACAAGCACAGTCCTCATCCAATGTA..................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................................................................................................AGCCTTTTTCCCCCCAACAGTCGACTCA................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................CCGCTTGAATTTATCTCTGTAGTGCTA....................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................TGCTAAGGATGAAGCgtgt............................................................................................................................................................................................. | 19 | gtgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................................................................................................CGCTTGAATTTATCTCTGTAGTGCTAA...................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................CACAGTCCTCATCCAATGTACCATAt................................................................................................................................ | 26 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................GCACAGTCCTCATCCAATGTACCATA................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AACAGTCGACTtacc................................................................................................................................................................................................................................................................................................................................... | 15 | tacc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................AGCACAGTCCTCATCCAATGTACCA.................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |