| Gene: MGC67181 | ID: uc008vtc.1_intron_2_0_chr4_147202906_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(20) TESTES |
| GTAGTGGGTGGTCTGAGGGACGCTCAGGCAAGGTCCTAAGTCTCGACATGGTGAGTACAGGGTCACTGCCCATATCGGGGAGGAGCAGGCGGATGAACCTGGGGAGCTGGTGTGGTGGGTTCTCCTCGGGACTGGGTGGTAAGCGGAGGCCAGATGTGGCCACCTGTGGGGTCTGTTTTAGTTCTAGTCATTCCCTGGACCCGGTAGTGGGCTCTGAATAACGTCACTATCCGGACTGCTTCTGCGCCAA .....................................................................................................................(((((.......(((((((....((((((((((((....))))).((....)).)))))))....))))))).......)))))................................................. .....................................................................................................................118.........................................................................................210...................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................TCCTCGGGACTGGGTGGTAAGCGGAG...................................................................................................... | 26 | 1 | 15.00 | 15.00 | 7.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................TCCTCGGGACTGGGTGGTAAGCGGAGG..................................................................................................... | 27 | 1 | 8.00 | 8.00 | 4.00 | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................GCGGATGAACCTGGGGAGCTGG............................................................................................................................................ | 22 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TATCGGGGAGGAGCAGGCGGATGAACC....................................................................................................................................................... | 27 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................................................................................................................................................................................TGAATAACGTCACTATCCGGACTGCTT......... | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TAAGTCTCGACATGGTGAGTACAGGG............................................................................................................................................................................................ | 26 | 1 | 3.00 | 3.00 | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................GTGGGTTCTCCTCGGGACTGGGTGG............................................................................................................... | 25 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TAGTTCTAGTCATTCCCTGGACCCGGTA............................................ | 28 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................TATCGGGGAGGAGCAGGCGGATGAACCT...................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TGTGGCCACCTGTGGGGTCTGTTT........................................................................ | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| ....................................TAAGTCTCGACATGGTGAGTACAGG............................................................................................................................................................................................. | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................TCCTCGGGACTGGGTGGTAAGCGGA....................................................................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TCCTCGGGACTGGGTGGTAAGCGGAGGC.................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................CAGGCGGATGAACCTGGGGAGCTGGTG.......................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TCAGGCAAGGTCCTAAGTCTCGACATa........................................................................................................................................................................................................ | 27 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......GTGGTCTGAGGGACGCTtt................................................................................................................................................................................................................................ | 19 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................TCGGGGAGGAGCAGGCGGATGAACCT...................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TGAATAACGTCACTATCCGGACTGCT.......... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................TTCTCCTCGGGACTGGGTGGTAAGCGG........................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TCAGGCAAGGTCCTAAGTCTCGACATG........................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................AGGCGGATGAACCTGGG................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TAACGTCACTATCCGGACTGCTTCTGCGC... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...GTGGGTGGTCTGAGGGAC..................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................TAAGTCTCGACATGGTGAGTACAGGGT........................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TAAGTCTCGACATGGTGAGTACAGGGTC.......................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TAGTGGGCTCTGAATAACGTCACTATC................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TATCGGGGAGGAGCAGGCGGATGAA......................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................CGGATGAACCTGGGGAGCTGG............................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TGAATAACGTCACTATCCGGACTGCTTCT....... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................................................TAGTCATTCCCTGGACCCGGTAGTGGGCT..................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................CCTAAGTCTCGACATGGTGAGTACAGG............................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................GTACAGGGTCACTGCCCATATCGGGGAGG....................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................CTCCTCGGGACTGGGTGGTAAGCGGA....................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TCGGGGAGGAGCAGGCGGATGAACCTG..................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................TCGGGACTGGGTGGTAAGCGGAGGC.................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TCTGAATAACGTCACTATCCGG................ | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TATCGGGGAGGAGCAGGCGGATGAAC........................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................TGCCCATATCGGGGAGGAGCAGGCGG.............................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TAAGTCTCGACATGGTGAGTACggg............................................................................................................................................................................................. | 25 | ggg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...GTGGGTGGTCTGAGGGA...................................................................................................................................................................................................................................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - |
| GTAGTGGGTGGTCTGAGGGACGCTCAGGCAAGGTCCTAAGTCTCGACATGGTGAGTACAGGGTCACTGCCCATATCGGGGAGGAGCAGGCGGATGAACCTGGGGAGCTGGTGTGGTGGGTTCTCCTCGGGACTGGGTGGTAAGCGGAGGCCAGATGTGGCCACCTGTGGGGTCTGTTTTAGTTCTAGTCATTCCCTGGACCCGGTAGTGGGCTCTGAATAACGTCACTATCCGGACTGCTTCTGCGCCAA .....................................................................................................................(((((.......(((((((....((((((((((((....))))).((....)).)))))))....))))))).......)))))................................................. .....................................................................................................................118.........................................................................................210...................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............GACGCTCAGGCAgct............................................................................................................................................................................................................................ | 15 | gct | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............GACGCTCAGGCAgctt............................................................................................................................................................................................................................ | 16 | gctt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................CAGGCAAGGTCCTAAGTC................................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |