| Gene: Casp9 | ID: uc008vpg.1_intron_0_0_chr4_141349902_f.3p | SPECIES: mm9 |
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(6) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(19) TESTES |
| CTGATTTCCTTCAGCTAAGTGTGGTCAGAGCAGTTTCCAACCTAGTGTTGGCAGTGACAGACTGTTGCTTGTTCCAGGGGTGGTGACACACACCTGGAAGCCAGGACTCAGGAGGCAGAGGCTAGGTGAGAAATGGGAAGTAGGTTAAGGGCCACATGGAAGTCCCTGGATAATGAGTGTCTGGTTTTCTATCCAAACAGCAGGCAGGATCTGGGTCTCGGCGGGATCAGGCCAGGCAGCTGGTCACAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT1() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................TGGAAGCCAGGACTCAGGAGGCAGA................................................................................................................................... | 25 | 1 | 12.00 | 12.00 | 9.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................TGGAAGCCAGGACTCAGGAGGCAGAGG................................................................................................................................. | 27 | 1 | 8.00 | 8.00 | 7.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................CAGCAGGCAGGATCTGGGTCTCGG............................. | 24 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGGAAGCCAGGACTCAGGAGGCAG.................................................................................................................................... | 24 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TCTGGGTCTCGGCGGGATCAGG................... | 22 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAGAAATGGGAAGTAGGTTAAGGGC.................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGGAAGCCAGGACTCAGGAGGCAGAGGC................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................AGGACTCAGGAGGCAGAGGCTAGa............................................................................................................................ | 24 | a | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TCCAAACAGCAGGCAGGATCTGGGTC................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TGAGTGTCTGGTTTTCTATCCAAACA................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................GGCAGGATCTGGGTCTCGGCGGGAT....................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAGAAATGGGAAGTAGGTTAAGGG................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................TGGAAGCCAGGACTCAGGAGGCAta................................................................................................................................... | 25 | ta | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................CAGGCAGGATCTGGGTCTCGGCGGGtt....................... | 27 | tt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................CAGGACTCAGGAGGCAGAGGCTAGG............................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................TGGAAGCCAGGACTCAGGAGGCA..................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GGATCTGGGTCTCGGacg.......................... | 18 | acg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TGATTTCCTTCAGCTAAGTGTGGTCAG.............................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGGCAGTGACAGACTGTTGCTTGTTCC............................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................TGACAGACTGTTGCTTGTTCCAGGGGa......................................................................................................................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GGGTCTCGGCGGGATCAGGCC................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................AAGCCAGGACTCAGGAGGCAGAGGCTAaa............................................................................................................................ | 29 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TCGGCGGGATCAGGCCAGGCAGCTGGTCAa... | 30 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TAATGAGTGTCTGGTTTTCTATCCAAAC.................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................................................TGACACACACCTGGAgtct.................................................................................................................................................... | 19 | gtct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................TGACAGACTGTTGCTTGTTCCAGGG........................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGGAAGCCAGGACTCAGGAGGCAtagg................................................................................................................................. | 27 | tagg | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGGAAGCCAGGACTCAGGAGG....................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................AGGTTAAGGGCCccgc............................................................................................. | 16 | ccgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................GGATCTGGGTCTCGGac........................... | 17 | ac | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGGAAGCCAGGACTCAGGAGGCAGAa.................................................................................................................................. | 26 | a | 1.00 | 12.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................TGACAGACTGTTGCTTGTTCCAGGGaa......................................................................................................................................................................... | 27 | aa | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TGAGTGTCTGGTTTTCTATCCAAACAGCAG............................................... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TCTGGGTCTCGGCGGGATCAGGCCAa............... | 26 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................GGCAGGATCTGGGTCTCGGCGGGATC...................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................GAAGCCAGGACTCAGGAGGCAGAGG................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTGATTTCCTTCAGCTAAGTGTGGTCAGAGCAGTTTCCAACCTAGTGTTGGCAGTGACAGACTGTTGCTTGTTCCAGGGGTGGTGACACACACCTGGAAGCCAGGACTCAGGAGGCAGAGGCTAGGTGAGAAATGGGAAGTAGGTTAAGGGCCACATGGAAGTCCCTGGATAATGAGTGTCTGGTTTTCTATCCAAACAGCAGGCAGGATCTGGGTCTCGGCGGGATCAGGCCAGGCAGCTGGTCACAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT1() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............GCTAAGTGTGGTCAGAGCAGTTTCCA................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................GGAAGTCCCTGGATtctc............................................................................... | 18 | tctc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |