| Gene: Ddi2 | ID: uc008vpd.1_intron_1_0_chr4_141245247_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(20) TESTES |
| TTTTTTACGGATGGGAAGGATCGAGGACTACAGCCCTGCATGCTGTGTGGTTTTTTTACGGATGGGAAGGATCGAGGACTACAGCCCTGCATGCTGTGTGGTTTTTTACGGATGGGAAGGATCGAGGACTACAGCCCTGCATGCTGTGTGGTTTTGCATTGTTAACCCACGTTTGCTTGTCTGTTTCCTAATCCAAACAGAGCGTCAGAAGCCATGATGCATGTAGTGTGTGTGTGCTGCAGCTGGAGTG ...................................................(((((..((..((..((((((((.....((((((.......))))))))))))))..))..))..)))))................................................................................................................................. ..................................................51................................................................................133................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT3() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..TTTTACGGATGGGAAGGATCGAGGA............................................................................................................................................................................................................................... | 25 | 4 | 19.50 | 19.50 | 5.25 | 0.75 | 9.00 | 1.50 | 0.75 | - | - | - | - | 0.75 | 1.50 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TTTTACGGATGGGAAGGATCGAGGAC......................................................................................................................... | 26 | 4 | 18.75 | 18.75 | 6.75 | 0.75 | 5.25 | 0.75 | - | - | 4.50 | - | 0.75 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TACGGATGGGAAGGATCGAGGACTA....................................................................................................................... | 25 | 4 | 6.00 | 6.00 | 0.75 | 3.00 | - | 0.75 | 0.75 | - | - | - | - | - | - | 0.75 | - | - | - | - | - | - | - | - |
| ...TTTACGGATGGGAAGGATCGAGGAC.............................................................................................................................................................................................................................. | 25 | 4 | 6.00 | 6.00 | 3.00 | - | - | - | - | - | - | - | 1.50 | 0.75 | - | - | - | 0.75 | - | - | - | - | - | - |
| ................................................................GGAAGGATCGAGGACTACAGCCCTGC................................................................................................................................................................ | 26 | 4 | 5.25 | 5.25 | - | - | - | - | - | - | - | 5.25 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TTACGGATGGGAAGGATCGAGGACT.......................................................................................................................................................................... | 25 | 4 | 4.50 | 4.50 | - | 2.25 | - | 0.75 | - | 0.75 | - | - | - | - | - | 0.75 | - | - | - | - | - | - | - | - |
| .....TACGGATGGGAAGGATCGAGGACT............................................................................................................................................................................................................................. | 24 | 4 | 4.50 | 4.50 | - | 3.00 | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TGTGGTTTTTTACGGATGGGAAGGAT................................................................................................................................ | 26 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TACGGATGGGAAGGATCGAGGACTACAGt................................................................................................................... | 29 | t | 3.00 | 0.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TACGGATGGGAAGGATCGAGGACTAC........................................................................................................................................................................................................................... | 26 | 4 | 3.00 | 3.00 | - | 1.50 | - | 0.75 | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TGCATGTAGTGTGTGTGTGCTGCAGC....... | 26 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TGCTGTGTGGTTTTTTACGGATGGG...................................................................................................................................... | 25 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TGCTGTGTGGTTTTTTACGGATGGGA..................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TTTACGGATGGGAAGGATCGAGGACT........................................................................................................................ | 26 | 4 | 2.25 | 2.25 | - | 1.50 | - | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................GTCAGAAGCCATGATGCATGTAG........................ | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TCCAAACAGAGCGTCAGAAGCCATGAT................................ | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TTTTTACGGATGGGAAGGATCGAGGA.......................................................................................................................... | 26 | 3 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TTTTTTACGGATGGGAAGGATCGAGG............................................................................................................................................................................. | 26 | 3 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGAAGGATCGAGGACTACAGCCCTGC.............................................................................................................. | 28 | 4 | 1.50 | 1.50 | - | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TACGGATGGGAAGGATCGAGGAC.............................................................................................................................................................................................................................. | 23 | 4 | 1.50 | 1.50 | - | - | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TGGTTTTTTTACGGATGGGAAGGAT.................................................................................................................................................................................. | 25 | 2 | 1.50 | 1.50 | 0.50 | - | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TACGGATGGGAAGGATCGAGGACTACAGC........................................................................................................................................................................................................................ | 29 | 4 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | 0.75 | - | - | 0.75 | - | - | - | - | - | - | - | - |
| .......CGGATGGGAAGGATCGAGGACTACAGC........................................................................................................................................................................................................................ | 27 | 4 | 1.50 | 1.50 | - | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGAAGGATCGAGGACTACAGCCCTG............................................................................................................... | 27 | 4 | 1.50 | 1.50 | - | - | - | - | - | 0.75 | - | - | - | - | - | - | - | - | 0.75 | - | - | - | - | - |
| .............................................TGTGGTTTTTTTACGGATGGGAAGGAT.................................................................................................................................................................................. | 27 | 2 | 1.50 | 1.50 | 1.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................TGCTGTGTGGTTTTTTTACGGATGG......................................................................................................................................................................................... | 25 | 2 | 1.00 | 1.00 | - | - | - | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TGTAGTGTGTGTGTGCTGCAGCTGGA... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TTCCTAATCCAAACAGAGCGTCAGAAG....................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGTGTGGTTTTTTACGGATGGGAAGGAT................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGCATGCTGTGTGGTTTTTTACGGAT......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TCCAAACAGAGCGTCAGAAGCCATGA................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TAATCCAAACAGAGCGTCAGAAGCCA.................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TAGTGTGTGTGTGCTGCAGCTGGAG.. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................TGTGTGTGTGCTGCAGCTGGA... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................TGGTTTTTTACGGATGGGAAGGATC............................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TTTTTTACGGATGGGAAGGATCGAG............................................................................................................................ | 25 | 3 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TTTTTACGGATGGGAAGGATCGAGG........................................................................................................................... | 25 | 3 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TGATGCATGTAGTGTGTGTGTGttgc.......... | 26 | ttgc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TGGTTTTTTACGGATGGGAAGGATCG.............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TAGTGTGTGTGTGCTGCAGCTGGgg.. | 25 | gg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TCCAAACAGAGCGTCAGAAGCCATG.................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TGGTTTTTTACGGATGGGAAGGAT................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................AGAAGCCATGATGCATGTAGTGTGT................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................................TGATGCATGTAGTGTGTGTGTGCTG........... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TGCTGTGTGGTTTTTTACGGATGGGAAGG.................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................TGCTGTGTGGTTTTTTTACGGATGGG........................................................................................................................................................................................ | 26 | 2 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGAAGGATCGAGGACTACAGCCCT................................................................................................................ | 26 | 4 | 0.75 | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.75 | - | - |
| .........................................................................................................TTACGGATGGGAAGGATCGAGGAC......................................................................................................................... | 24 | 4 | 0.75 | 0.75 | - | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TTTTACGGATGGGAAGGATCGAGG............................................................................................................................................................................. | 24 | 4 | 0.75 | 0.75 | - | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TTACGGATGGGAAGGATCGAGGACTA....................................................................................................................... | 26 | 4 | 0.75 | 0.75 | - | - | - | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TACGGATGGGAAGGATCGAGGACTACt..................................................................................................................... | 27 | t | 0.75 | 3.00 | - | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TTTTACGGATGGGAAGGATCGAGGACT........................................................................................................................ | 27 | 4 | 0.75 | 0.75 | - | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TTTACGGATGGGAAGGATCGAGGA.......................................................................................................................... | 24 | 4 | 0.75 | 0.75 | - | - | - | - | - | - | - | - | - | 0.75 | - | - | - | - | - | - | - | - | - | - |
| .......................................................TTACGGATGGGAAGGATCGAGGACTACAG...................................................................................................................................................................... | 29 | 4 | 0.75 | 0.75 | - | - | - | - | - | - | - | - | - | - | - | 0.75 | - | - | - | - | - | - | - | - |
| .............................................................ATGGGAAGGATCGAGGACTACAGCC.................................................................................................................................................................... | 25 | 4 | 0.75 | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.75 | - |
| ...........................................TGTGTGGTTTTTTTACGGATGGGAAGG.................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGTGGTTTTTTTACGGATGGGAAGGATCGAGG............................................................................................................................................................................. | 32 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ....................................TGCATGCTGTGTGGTTTTTTTACGGA............................................................................................................................................................................................ | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| ...............................................TGGTTTTTTTACGGATGGGAAGGA................................................................................................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................TTTTTTTACGGATGGGAAGGATCGAGG............................................................................................................................................................................. | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| ...............................................TGGTTTTTTTACGGATGGGAAGGATC................................................................................................................................................................................. | 26 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................TTTTTTTACGGATGGGAAGGATCGAG.............................................................................................................................................................................. | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| TTTTTTACGGATGGGAAGGATCGAGGACTACAGCCCTGCATGCTGTGTGGTTTTTTTACGGATGGGAAGGATCGAGGACTACAGCCCTGCATGCTGTGTGGTTTTTTACGGATGGGAAGGATCGAGGACTACAGCCCTGCATGCTGTGTGGTTTTGCATTGTTAACCCACGTTTGCTTGTCTGTTTCCTAATCCAAACAGAGCGTCAGAAGCCATGATGCATGTAGTGTGTGTGTGCTGCAGCTGGAGTG ...................................................(((((..((..((..((((((((.....((((((.......))))))))))))))..))..))..)))))................................................................................................................................. ..................................................51................................................................................133................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT3() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) |
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