| Gene: C230096C10Rik | ID: uc008vmf.1_intron_8_0_chr4_138916867_f | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| CCACAGGGGAGAAGACAGTGGCTGCAGTCATGACCTGTCGCACTGAAGTGGTGAGTACTGTGGGTGACAGCGAGCATGTGGGCCTCCTTATCTTTGGGAACCCTGATGGTTGGTGTCACAGGGGTGGGAGGCTGCAGAGAGAGGAGTTCTCCTCTCATCTCTACAGCTTTCTACAGAGACTCCACCTCAATAGGAACAGGATCCTGATGTAGCCACCTTAGTCTCTCAGACTGTTATGGGTTCATAGGCTTGTGAGGAGGGCCATGAAAAGTAAGATTTGCCTTCTGACTGTACTGAGAAGACAGAAGTTTCTGGGAGGTAACCCTTTGGCTGAGGGTTCTCTCATCTTCCTTTCTCTAGCAAAAACCTGTCAGTGCTGGAGATGGGTCTGTGGCAAGCTTTCCTGAGAC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGTACTGTGGGTGACAGCGAGC............................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 12.00 | 12.00 | 4.00 | 5.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................CAAAAACCTGTCAGTGCTGGAGATGG........................ | 26 | 1 | 8.00 | 8.00 | - | - | 4.00 | - | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ...................................................TGAGTACTGTGGGTGACAGCGAGC............................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 5.00 | 5.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................................................................................................................................................................................................................................TGTCAGTGCTGGAGATGGGTCTGTGG................ | 26 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................GTGAGTACTGTGGGTGACAGCGAGCA.............................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................GCTGGAGATGGGTCTGTGGCAA............. | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................TGTCAGTGCTGGAGATGGGTCTGTt................. | 25 | t | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................GTGAGTACTGTGGGTGACAGCGAG................................................................................................................................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................AAAAACCTGTCAGTGCTGGAGATGGGT...................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TGACCTGTCGCACTGAAGTG........................................................................................................................................................................................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................CATGACCTGTCGCACTGAAG.......................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................TCAGTGCTGGAGATGGGTCTGTGGC............... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................ACCTGTCGCACTGAAGTG........................................................................................................................................................................................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........AGAAGACAGTGGCTGCAGTCATGACCTG..................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................GTTTCTGGGAGGTAACtt..................................................................................... | 18 | tt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................TGGAGATGGGTCTGTGGCAAGCTTTC....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................TGTCAGTGCTGGAGATGGGTCTGT.................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| CCACAGGGGAGAAGACAGTGGCTGCAGTCATGACCTGTCGCACTGAAGTGGTGAGTACTGTGGGTGACAGCGAGCATGTGGGCCTCCTTATCTTTGGGAACCCTGATGGTTGGTGTCACAGGGGTGGGAGGCTGCAGAGAGAGGAGTTCTCCTCTCATCTCTACAGCTTTCTACAGAGACTCCACCTCAATAGGAACAGGATCCTGATGTAGCCACCTTAGTCTCTCAGACTGTTATGGGTTCATAGGCTTGTGAGGAGGGCCATGAAAAGTAAGATTTGCCTTCTGACTGTACTGAGAAGACAGAAGTTTCTGGGAGGTAACCCTTTGGCTGAGGGTTCTCTCATCTTCCTTTCTCTAGCAAAAACCTGTCAGTGCTGGAGATGGGTCTGTGGCAAGCTTTCCTGAGAC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................TCTCCTCTCATCTCTACAGCTTTCTA............................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................GAGGCTGCAGAGAGAGGA......................................................................................................................................................................................................................................................................... | 18 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 |