| Gene: Hspg2 | ID: uc008vjc.1_intron_40_0_chr4_137091421_f | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.ip |
(11) TESTES |
| CCGTGAAGATGGACGGCCCTTGCCCAGCAGCGCTCAACAGCGGCATCAAGGTACTCGTGCACCGACCTCTGTCCCATGAGTCAGCCCTGTTCCTGTCCTGCTTGCGGGGGTGGGGGTGGGGCTTGAGCTGGAGCTAGACCTAGACAAGTCTCTCCCCACCCCAGGCTCTGAGCTCCACTTCCCTAGCGTGCAGCCCTCCGACGCCGGCGTCTAC ..........................................................................................................((((((((((.((((((((..((((........)))).)))))))))))))))))).................................................... ..........................................................................................................107......................................................164................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................GACAAGTCTCTCCCCACCCCAGa................................................. | 23 | a | 7.00 | 0.00 | 7.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................GACAAGTCTCTCCCCACCCCAGt................................................. | 23 | t | 3.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | 1.00 |
| ..........................................................................................................................TTGAGCTGGAGCTAGACCTAGACA.................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TAGCGTGCAGCCCTCCGACGCCGGCGTCT.. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................CGGGGGTGGGGGTGGGGCTTGAGC...................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................................................................GACAAGTCTCTCCCCACCCCAGttt............................................... | 25 | ttt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................GGGGGTGGGGCTTGAGCTGGAG................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................GCGGCATCAAGGTACggca............................................................................................................................................................ | 19 | ggca | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................GACAAGTCTCTCCCCACCCCAGag................................................ | 24 | ag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| CCGTGAAGATGGACGGCCCTTGCCCAGCAGCGCTCAACAGCGGCATCAAGGTACTCGTGCACCGACCTCTGTCCCATGAGTCAGCCCTGTTCCTGTCCTGCTTGCGGGGGTGGGGGTGGGGCTTGAGCTGGAGCTAGACCTAGACAAGTCTCTCCCCACCCCAGGCTCTGAGCTCCACTTCCCTAGCGTGCAGCCCTCCGACGCCGGCGTCTAC ..........................................................................................................((((((((((.((((((((..((((........)))).)))))))))))))))))).................................................... ..........................................................................................................107......................................................164................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............ACGGCCCTTGCCCAGCAGCGCTCAACA............................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GAGCTGGAGCTAGACCTAcgt........................................................................ | 21 | cgt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |