| Gene: Ccdc21 | ID: uc008ved.1_intron_10_0_chr4_133712287_r.3p | SPECIES: mm9 |
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(4) PIWI.ip |
(10) TESTES |
| GGCCTTAAACACAGGATAATTCTTCTACTCTACCTCCAAGTGCTAGGATCATAGGCATAAGCCAGGCTTCCACCTCCTCCCTGCTCCTTCTGATCACACTCTCTCTACTTGGTCTGAAAACAAAGAATGTCTAGCATTGCCACCAAACAAGAAAAACTGCTGCTTTAATCTTAACTCATGGAAGACTCTTCTCTCCACAGATTTTTGCAGCTCAAGTGGCAGCCCTTCCTTCCAGCCAATCAAAAGCCAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................GTCTGAAAACAAAGAATGTCTAGCATTGCCACCAAACAAGAAAAACTGCTGC....................................................................................... | 52 | 1 | 67.00 | 67.00 | 67.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CAAGTGGCAGCCCTTCCTTCCAGCCAAT.......... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................TCAAGTGGCAGCCCTTCCTTCCAG............... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................TCCTTCTGATCACACTCTCTCTACTTGG.......................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................TGCTAGGATCATAGGCATAAGCCAGGCT...................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................AATCTTAACTCATGGAAGACTCTTt........................................................... | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................................................................................................................................TTAACTCATGGAAGACTCTTCTCTCC...................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................................................................................TTCCAGCCAATCAAAAGtag. | 20 | tag | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| GGCCTTAAACACAGGATAATTCTTCTACTCTACCTCCAAGTGCTAGGATCATAGGCATAAGCCAGGCTTCCACCTCCTCCCTGCTCCTTCTGATCACACTCTCTCTACTTGGTCTGAAAACAAAGAATGTCTAGCATTGCCACCAAACAAGAAAAACTGCTGCTTTAATCTTAACTCATGGAAGACTCTTCTCTCCACAGATTTTTGCAGCTCAAGTGGCAGCCCTTCCTTCCAGCCAATCAAAAGCCAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................TCTCTACTTGGTCTGA..................................................................................................................................... | 16 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................CTTCCTTCCAGCCAATCcgga......... | 21 | cgga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - |