| Gene: BC008163 | ID: uc008vbz.1_intron_7_0_chr4_132476707_r.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(5) PIWI.ip |
(20) TESTES |
| ACCAGCGCTTCCCCTTCGAGGCGCTGTCTCAGGGGCAGCAGCTGTGCAAGGTGCGCGGGCTGGGGCGGCGGCCGGGAGCTGGGGACGCTCCAGGCGCGGTTCGGAACTCTCGGTCCAGCGAGGACGGCTGCCGGGGTCCCCTCGGGCAGGGTGTGGCCGGCCCGTTTTGCGGACGAGCTGAGCCGGGCCCGCAGAGGACTGCAGGGTACTTGTGGGAGCCCCGGGCGGAGTCCAGGCCCTGGCAGCCGGC ............................................................................................................(((((..((((.......)))))))))....((((..((.((((.((((((((.((((.....)))).)))).)))).)))))).))))..................................................... ............................................................................................................109........................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................TCGGAACTCTCGGTCCAGCGAGGACGG........................................................................................................................... | 27 | 1 | 14.00 | 14.00 | 1.00 | 12.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................TCCAGGCGCGGTTCGGAACTCTCGG......................................................................................................................................... | 25 | 1 | 6.00 | 6.00 | 2.00 | - | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGGGC.............................................................. | 21 | 1 | 6.00 | 6.00 | - | - | 2.00 | - | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGGGCCCGC.......................................................... | 25 | 1 | 5.00 | 5.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGGGCCC............................................................ | 23 | 1 | 4.00 | 4.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................TTGCGGACGAGCTGAGCCGGGCCCG........................................................... | 25 | 1 | 4.00 | 4.00 | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGGGCCCG........................................................... | 24 | 1 | 4.00 | 4.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGGGCC............................................................. | 22 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................CGGACGAGCTGAGCCGGGCCCGCAG........................................................ | 25 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TTTTGCGGACGAGCTGAGCCGGGC.............................................................. | 24 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................TGCAGGGTACTTGTGGGAGCCCCGG.......................... | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................TCGGAACTCTCGGTCCAGCGAGGACGGC.......................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGGGCCCGa.......................................................... | 25 | a | 2.00 | 4.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TCCAGGCGCGGTTCGGAACTCTCGGT........................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................GAGGACTGCAGGGTACTTGTGGGAa................................ | 25 | a | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TTCGGAACTCTCGGTCCAGCGAGGACGGC.......................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TCGAGGCGCTGTCTCAGGGGCAGCAG................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGGGCa............................................................. | 22 | a | 1.00 | 6.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................TCCAGCGAGGACGGCTGCCGGG................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGGGAGCCCCGGGCGGAGTCCAGGCCC........... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TTTGCGGACGAGCTGAGC................................................................... | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................CAGGCGCGGTTCGGAACTCTCGGTC....................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................TGTGCAAGGTGCGCGGGCTGGGGCGGt..................................................................................................................................................................................... | 27 | t | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGGG............................................................... | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TCGGAACTCTCGGTCCAGCGAGGACG............................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................CGGCCGGGAGCTGGG....................................................................................................................................................................... | 15 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................................TTTGCGGACGAGCTGAGCCGGGCCCGC.......................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TTTGCGGACGAGCTGAGCCGGGCCCG........................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................CGAGGCGCTGTCTCAGGGGCAGC................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGG................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................GCGGACGAGCTGAGCCGGGCCCGCAGA....................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGTGCAAGGTGCGCGGGCTGGGGCGG...................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................AGGCGCGGTTCGGAACTCTCGGTCCAGC................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TGCGGACGAGCTGAGCCGGGa.............................................................. | 21 | a | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................TGCAGGGTACTTGTGGGAGCCCCGGt......................... | 26 | t | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TCGGAACTCTCGGTCCAGCGAGGACGGCT......................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TGAGCCGGGCCCGCAGAGGACTGCAGGGT........................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TTTTGCGGACGAGCTGAGCCGGG............................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................CTGAGCCGGGCCCGCAGAGGACTGCAG.............................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................TGTGCAAGGTGCGCGGGCTGGGG......................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................TCGGAACTCTCGGTCCAGCGAGGAC............................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................ACTGCAGGGTACTTGTag................................... | 18 | ag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ACCAGCGCTTCCCCTTCGAGGCGCTGTCTCAGGGGCAGCAGCTGTGCAAGGTGCGCGGGCTGGGGCGGCGGCCGGGAGCTGGGGACGCTCCAGGCGCGGTTCGGAACTCTCGGTCCAGCGAGGACGGCTGCCGGGGTCCCCTCGGGCAGGGTGTGGCCGGCCCGTTTTGCGGACGAGCTGAGCCGGGCCCGCAGAGGACTGCAGGGTACTTGTGGGAGCCCCGGGCGGAGTCCAGGCCCTGGCAGCCGGC ............................................................................................................(((((..((((.......)))))))))....((((..((.((((.((((((((.((((.....)))).)))).)))).)))))).))))..................................................... ............................................................................................................109........................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................AGCCGGGCCCGCAGAGGACTGC................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |