| Gene: Rcc1 | ID: uc008vbd.1_intron_8_0_chr4_131895157_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(9) TESTES |
| GAGAAGGTCACCCCCAGAAGATGCCATCCCCAAAAGCAAGAAGGTGAAAGGTGAGCTGGCTGGGATCCCTTCTGGGCTCTGAGTATTCTCTCAAAGCGGTGAGACATCTGGGCCTACGCTCCTTCCTCCCCGGCTTGAAGCTGTGAGGGGCTTAGATGTCCAAGGCCCCTGCTCAACCGGGGGTTCTCCTGCACCTCCCCTAGTTCAGTTCTTTAGCAGTCAGAAAAAAGGCCCAAGCCAAGGCTCATCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGCTGGCTGGGATCCCTTCTGGGCTCTGAGTATTCTCTCAAAGCGGTGA.................................................................................................................................................... | 52 | 1 | 45.00 | 45.00 | 45.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................TCTCAAAGCGGTGAGACATCTGGGCC........................................................................................................................................ | 26 | 1 | 7.00 | 7.00 | - | 7.00 | - | - | - | - | - | - | - | - |
| ...........................CCCCAAAAGCAAGAAGGTGAAAGG....................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TCCCCTAGTTCAGTTCTTTAGCAGTCA............................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................TTCTCTCAAAGCGGTGAGACATCTGG........................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| .......TCACCCCCAGAAGATtttc................................................................................................................................................................................................................................ | 19 | tttc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........CCCCAGAAGATGCCATCCCCAAAAGCA.................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................AGCTGGCTGGGATCCCaa................................................................................................................................................................................... | 18 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................................................TCTCAAAGCGGTGAGACATCTGGGCCT....................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................CCAAAAGCAAGAAGGTGAAAGt....................................................................................................................................................................................................... | 22 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| GAGAAGGTCACCCCCAGAAGATGCCATCCCCAAAAGCAAGAAGGTGAAAGGTGAGCTGGCTGGGATCCCTTCTGGGCTCTGAGTATTCTCTCAAAGCGGTGAGACATCTGGGCCTACGCTCCTTCCTCCCCGGCTTGAAGCTGTGAGGGGCTTAGATGTCCAAGGCCCCTGCTCAACCGGGGGTTCTCCTGCACCTCCCCTAGTTCAGTTCTTTAGCAGTCAGAAAAAAGGCCCAAGCCAAGGCTCATCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................CTCAAAGCGGTtctc...................................................................................................................................................... | 15 | tctc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................TCTCAAAGCGGTGctc..................................................................................................................................................... | 16 | ctc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - |