| Gene: AK005651 | ID: uc008uyl.1_intron_1_0_chr4_129638053_f | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| CTCCTGGCTTTGCTTTCATCCCGTCCGATGGCCACCTGGACTGCGCATGCGTGAGTTTTGCCTCTCGGTGTTCTCGGTTTGAGGTGGGTGGGAGACTTTTGACGGTGGCCGTAAGCTCTGGTCCACCCACCTTACAGAAACATCCTAACCGAAGACTCAGTTCCTTAAACAACCGTGACTTGTTGGACCTCAGTTCTGCCTTTTCTGGCTGTGTCGTCTTAGGTTTGTGCCCTTTTTTGTGACTCAGTTTCCTTCTCTGTAAATAGGTGTACTAATCTTGAACTCGCTAGGTTAGGTGAGGATTCGTGGACTGCAACTTTGGCGCACACTCGTTGATGTCCTGGTGCACAGTAGGCAGTGTGTGGTTGTTTTCTGCCTTCCTCCTTAGAGTCCAGTTTCACTTGGAACCCCCGACATAAGCAAATGTATTTCCTTTGCAGCTCCAGACATGGCAGGAGAAACTTCCAGATGTCAGGGCAGACCGGATTCC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT2() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................TACAGAAACATCCTAACCGAAGACTC............................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TCCTAACCGAAGACTCAGTTCCTTAA.................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAGGAGAAACTTCCAGATGTCAGGGC............ | 29 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................CAGAAACATCCTAACCGAAGACTCAGT......................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGATGTCAGGGCAGACCGGAT... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................................TAACCGAAGACTCAGTTC....................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TACAGAAACATCCTAACCGAAGACTCA........................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TGGACTGCGCATGCGTGAGTTTTGCCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................GGTGAGGATTCGTGGACTGCAACTT........................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TCCTAACCGAAGACTCAGTTCCTTAAA................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGATGTCAGGGCAGACCGGATTC. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TACAGAAACATCCTAACCGAAGACTCAGT......................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TGACTTGTTGGACCTCAGTTCTGCCTT................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................GAGGTGGGTGGGAGACTTTTGAC................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................................................................................................................................................TCTTGAACTCGCTAGGTTAGGTGA............................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGACATGGCAatca................................ | 19 | atca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ....................................................................................................................................................................................................................................................................................................TAGGTGAGGATTCGTGGACTGCAAC............................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAAACTTCCAGATGTCAGGG............. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................TCTCGGTGTTCTCGGTTTGAGGTGG................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................TAGGTTAGGTGAGGATTCGTGGAC................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TGTTCTCGGTTTGAGGTGGGTGGGA............................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TGACGGTGGCCGTAAGCTCTGGTC............................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TTTGACGGTGGCCGTAAGCTCTGGTCC.............................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................ATCCCGTCCGATctgc......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 16 | ctgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................TGACGGTGGCCGTAAGCTCTGGTCCAC............................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATGGCAGGAGAAACTTCCAGATG................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................TCCCGTCCGATGGCCACCTGGACTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................TGGCCACCTGGACTGCGCATGCGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TGACGGTGGCCGTAAGCTCTGG................................................................................................................................................................................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................CCTTAAACAACCGTGACTTGTTGGACCT............................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................CAGAAACATCCTAACCGAAGACTCAGTTC....................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| CTCCTGGCTTTGCTTTCATCCCGTCCGATGGCCACCTGGACTGCGCATGCGTGAGTTTTGCCTCTCGGTGTTCTCGGTTTGAGGTGGGTGGGAGACTTTTGACGGTGGCCGTAAGCTCTGGTCCACCCACCTTACAGAAACATCCTAACCGAAGACTCAGTTCCTTAAACAACCGTGACTTGTTGGACCTCAGTTCTGCCTTTTCTGGCTGTGTCGTCTTAGGTTTGTGCCCTTTTTTGTGACTCAGTTTCCTTCTCTGTAAATAGGTGTACTAATCTTGAACTCGCTAGGTTAGGTGAGGATTCGTGGACTGCAACTTTGGCGCACACTCGTTGATGTCCTGGTGCACAGTAGGCAGTGTGTGGTTGTTTTCTGCCTTCCTCCTTAGAGTCCAGTTTCACTTGGAACCCCCGACATAAGCAAATGTATTTCCTTTGCAGCTCCAGACATGGCAGGAGAAACTTCCAGATGTCAGGGCAGACCGGATTCC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT2() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................TCCACCCACCTTACAGAAACATCCTA....................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGACATGGCAGGAGAAACTTCCAGA..................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................ACCGAAGACTCAGTTCCTTAAACAACCG........................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....TGGCTTTGCTTTCATCCCGTCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........GCTTTCATCCCGTCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |