| Gene: Khdrbs1 | ID: uc008uyc.1_intron_9_0_chr4_129404916_r.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(20) TESTES |
| GGGATTAAAGGCGTGCGCCACTATGCCTGGCTGCTAATTATTATTAAATAATAGGTGTAATATATCTTGAGTCAAATTGGGATCTCATAATACAAAGATTCCTACTTTATAGGGTTGTTGAAGATCAGATGGCATGTTATATATATTTAAATTTTTATTGAGACATGTGTACTAGAATTCTGTTTTTAATTTTCTGACAGTTCAATTTTGTGGGGAAGATTCTTGGACCACAAGGAAATACAATCAAAAG ...............................................................................................................(((..((((((((.((((.....((.(((((((.(((.(((....))).))).))))))).))....))))))))))))..)))....................................................... ........................................................................................................105............................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| .............................................................................................................TAGGGTTGTTGAAGATCAGATGGtgta.................................................................................................................. | 27 | tgta | 46.00 | 0.00 | 23.00 | 9.00 | 4.00 | 6.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TAGGGTTGTTGAAGATCAGATGGtgt................................................................................................................... | 26 | tgt | 25.00 | 0.00 | 15.00 | 6.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................TATAGGGTTGTTGAAGATCAGATGGt..................................................................................................................... | 26 | t | 17.00 | 5.00 | 6.00 | 7.00 | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................TATAGGGTTGTTGAAGATCAGATGGtg.................................................................................................................... | 27 | tg | 11.00 | 5.00 | 2.00 | 5.00 | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TAGGGTTGTTGAAGATCAGATGGtg.................................................................................................................... | 25 | tg | 6.00 | 0.00 | 2.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TTATAGGGTTGTTGAAGATC............................................................................................................................ | 20 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TATAGGGTTGTTGAAGATCAGATGG...................................................................................................................... | 25 | 1 | 5.00 | 5.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TTATAGGGTTGTTGAAGATCAGATGG...................................................................................................................... | 26 | 1 | 5.00 | 5.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TATAGGGTTGTTGAAGATCAGATGGtgt................................................................................................................... | 28 | tgt | 4.00 | 5.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TTTATAGGGTTGTTGAAGATCAGATGG...................................................................................................................... | 27 | 1 | 4.00 | 4.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TTGGACCACAAGGAAATACAATCAAAAG | 28 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGGACCACAAGGAAATACAATCAAAAG | 27 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TAGGGTTGTTGAAGATCAGATGGt..................................................................................................................... | 24 | t | 3.00 | 0.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TTATAGGGTTGTTGAAGATCAGATGGt..................................................................................................................... | 27 | t | 3.00 | 5.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................CAATTTTGTGGGGAAGATTCTTGGA....................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGTGGGGAAGATTCTTGGACCACAAG................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................ATGTGTACTAGAATTCTGTTTTTAATTT.......................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................TTTATAGGGTTGTTGAAGATCAGATGGt..................................................................................................................... | 28 | t | 1.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TTCCTACTTTATAGGGTTGTTGAAGAT............................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TACAAAGATTCCTACTTTATAGGGTTGT.................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................TAGGTGTAATATATCTTGAGTCAAATTGGG......................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................................................................................................................................TTGGACCACAAGGAAATACAATCAAAA. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TTTGTGGGGAAGATTCTTGGAC...................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................................................................................................................TGGACCACAAGGAAATACAATCAAAAGaatc | 31 | aatc | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TCTTGGACCACAAGGAAATACAATCA.... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................ATTTTGTGGGGAAGATTC............................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................TATAGGGTTGTTGAAGATCAGATGGtgta.................................................................................................................. | 29 | tgta | 1.00 | 5.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................GTACTAGAATTCTGTTTTTAATTT.......................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................AGATTCTTGGACCACAAGGAAATACAA....... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TTGGACCACAAGGAAATACAATCAAA.. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GAAGATTCTTGGACCACAAGGAAg............ | 24 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TCTTGGACCACAAGGAAATACAATCAAA.. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TACTTTATAGGGTTGTTGAAGATCAG.......................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................ATAGGGTTGTTGAAGATCAGATGG...................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TAATAGGTGTAATATATCTTGAGTCA................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................AGGGTTGTTGAAGATCAGATGGtgta.................................................................................................................. | 26 | tgta | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TTTTGTGGGGAAGATTCTTGGACC..................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TAGGGTTGTTGAAGATCAGATGGtgg................................................................................................................... | 26 | tgg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| GGGATTAAAGGCGTGCGCCACTATGCCTGGCTGCTAATTATTATTAAATAATAGGTGTAATATATCTTGAGTCAAATTGGGATCTCATAATACAAAGATTCCTACTTTATAGGGTTGTTGAAGATCAGATGGCATGTTATATATATTTAAATTTTTATTGAGACATGTGTACTAGAATTCTGTTTTTAATTTTCTGACAGTTCAATTTTGTGGGGAAGATTCTTGGACCACAAGGAAATACAATCAAAAG ...............................................................................................................(((..((((((((.((((.....((.(((((((.(((.(((....))).))).))))))).))....))))))))))))..)))....................................................... ........................................................................................................105............................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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