| Gene: Khdrbs1 | ID: uc008uyc.1_intron_3_0_chr4_129393431_r.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(14) TESTES |
| GTTGTTTCTCAAGGGAACTGTACAGTAATGTACGGCTAGCAGTTTGACTTCTCATTACTCACCGTGTAGGCGGTTACCCCTATTGATCAAGGAGGCCAAGTAAAGAGGACAGCAAGGCACGCTTGGGGTGTGACGTGGTTCTAGGAGAGACAGTGTTATCAGTAGCATGTACTGTAAGTTGTTTTGCTTTTTTCCCACAGGACAAGATGACTGGAATGGGACCAGGCCATCACTGAAGGCTCCTCCAGCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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| ...........................................................................................................................TGGGGTGTGACGTGGTTCTAGGAGAGACAGTGTTATCAGTAGCATGTACTGT........................................................................... | 52 | 1 | 243.00 | 243.00 | 243.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................CACTGAAGGCTCCTCCAGCTagtc | 24 | agtc | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................ATGACTGGAATGGGACCAGGC....................... | 21 | 2 | 1.50 | 1.50 | - | - | - | 0.50 | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TGGGACCAGGCCATCACTGAAGGa.......... | 24 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................................................GATGACTGGAATGGGACCAGG........................ | 21 | 2 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TACAGTAATGTACGGCTAGCAGTTTGACTT........................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................TGTGACGTGGTTCTAGGAGA...................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................ACAAGATGACTGGAATGGGACCAGGCC...................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| ...........................................................................................................................................................................................................AAGATGACTGGAATGGGACCAGG........................ | 23 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGGAATGGGACCAGGCCATCACTGAAGGC.......... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ...............................................................................................................................................................................................................TGACTGGAATGGGACCAGGC....................... | 20 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................CCATCACTGAAGGCTCCTCC.... | 20 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................ATGGGACCAGGCCATCACTGAAGGCTC........ | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ..........................................................................................................................................................................................................CAAGATGACTGGAATGGGACCAGGCC...................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| .........................................................................................................................................................................................................ACAAGATGACTGGAATGGG.............................. | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ...........................................................................................................................................................................................................AAGATGACTGGAATGGGACCAGGC....................... | 24 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GACAAGATGACTGGAA.................................. | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |
| GTTGTTTCTCAAGGGAACTGTACAGTAATGTACGGCTAGCAGTTTGACTTCTCATTACTCACCGTGTAGGCGGTTACCCCTATTGATCAAGGAGGCCAAGTAAAGAGGACAGCAAGGCACGCTTGGGGTGTGACGTGGTTCTAGGAGAGACAGTGTTATCAGTAGCATGTACTGTAAGTTGTTTTGCTTTTTTCCCACAGGACAAGATGACTGGAATGGGACCAGGCCATCACTGAAGGCTCCTCCAGCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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