| Gene: Tmem39b | ID: uc008uya.1_intron_2_0_chr4_129361744_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) PIWI.ip |
(12) TESTES |
| ACAGTAGAGCAGTTTTGACCTTAGGAAATCAGCTGGTGGGCACAGGGTCCAAGCTGCCCTTTTGCAGTGAGTCATTGTTGGTTTCGGGTGGTCTTGAAGTCTTCACAGTGCTATTCTAGCTTCTAGGTCGACTCAGGGAGGGGAGCGAGAGTAGGCCACTATGGACATGCTGAGCCTGACCTGCCTCCTGCTCTCCCCAGAATACACATTACTATGACAAGCGCTGGTCCTGTGAGCTCTTCCTGCTGGT ........................................................................((((((.(((((((((....))))))).))..))))))(((((((.((((((...((......))...)))))).)))))))................................................................................................ .....................................................................70...........................................................................................163..................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGC.............................................................................................. | 23 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TGACAAGCGCTGGTCCTGTGAGCT............ | 24 | 1 | 3.00 | 3.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................GCTCTCCCCAGAATACct........................................... | 18 | ct | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGt................................................. | 23 | t | 2.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 |
| ......................................................................................................................................AGGGAGGGGAGCGAGAGTAGGCCAt........................................................................................... | 25 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TGACAAGCGCTGGTCCTGTGAGCTC........... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................................CAAGCGCTGGTCCTGTGAG.............. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................TTGTTGGTTTCGGaac................................................................................................................................................................ | 16 | aac | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGa.............................................................................................. | 23 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CTATGGACATGCTGAGCCTGA....................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................AGGGAGGGGAGCGAGAGTA................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGG............................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................AGGGGAGCGAGAGTAGGCCACT.......................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................CTATGACAAGCGCTGGTCCTGTGAGC............. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ACAGTAGAGCAGTTTTGACCTTAGGAAATCAGCTGGTGGGCACAGGGTCCAAGCTGCCCTTTTGCAGTGAGTCATTGTTGGTTTCGGGTGGTCTTGAAGTCTTCACAGTGCTATTCTAGCTTCTAGGTCGACTCAGGGAGGGGAGCGAGAGTAGGCCACTATGGACATGCTGAGCCTGACCTGCCTCCTGCTCTCCCCAGAATACACATTACTATGACAAGCGCTGGTCCTGTGAGCTCTTCCTGCTGGT ........................................................................((((((.(((((((((....))))))).))..))))))(((((((.((((((...((......))...)))))).)))))))................................................................................................ .....................................................................70...........................................................................................163..................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................GCTCTCCCCAGAATACACATTACTA.................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |