| Gene: Zmym4 | ID: uc008uty.1_intron_3_0_chr4_126547539_r.5p | SPECIES: mm9 |
|
|
(3) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| AAAAGTATGACCCAGACAGTATCTTATACCTGTGCCTTGGAATTCAGCAGGTACCAATTTCAATAACTTACACATTTGATTGGTTTCATCATCTGAGATAATTAATGAATTAAATTGAAAATGAATGTATATTGTCATTTAGTTTTGTTATAAACTTTTTTTATTTTGGGTGAACTGCTCCAATTTAAAGTCTGAACATATAGCCCTTCCTAAATGAAACTGAGAATGTTGGTAGAATAAGAGACATGGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................GTTATAAACTTTTTTTATTTTGGGTGAACTGCTCCAATTTAAAGTCTGAACA.................................................... | 52 | 1 | 60.00 | 60.00 | 60.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TCTTATACCTGTGCCTTGGAATTCAGCA......................................................................................................................................................................................................... | 28 | 1 | 12.00 | 12.00 | - | 2.00 | 4.00 | - | 3.00 | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - |
| .....................TCTTATACCTGTGCCTTGGAATTCAGC.......................................................................................................................................................................................................... | 27 | 1 | 6.00 | 6.00 | - | 1.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - |
| ......................CTTATACCTGTGCCTTGGAATTCAGC.......................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................AATTAATGAATTAAATTGAAAATGAATGTA......................................................................................................................... | 30 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................TTATACCTGTGCCTTGGAATTCAGCA......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................TCTTATACCTGTGCCTTGGAATTCAGCAt........................................................................................................................................................................................................ | 29 | t | 1.00 | 12.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TACCTGTGCCTTGGAATTCAGCAGGTt..................................................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......TGACCCAGACAGTATCTTATACCTGTGC....................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TTATACCTGTGCCTTGGAATTCAGCAG........................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......TGACCCAGACAGTATCTTAT............................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............ACAGTATCTTATACCTGTGCCTTGGA................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............ACAGTATCTTATACCTGTGCCTTGGAAT............................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TATACCTGTGCCTTGGAATTCAGCAGta...................................................................................................................................................................................................... | 28 | ta | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................TGCCTTGGAATTCAGCAG........................................................................................................................................................................................................ | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .......................................................................................................................................................................................................................GAAACTGAGAATGTTGG.................. | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| AAAAGTATGACCCAGACAGTATCTTATACCTGTGCCTTGGAATTCAGCAGGTACCAATTTCAATAACTTACACATTTGATTGGTTTCATCATCTGAGATAATTAATGAATTAAATTGAAAATGAATGTATATTGTCATTTAGTTTTGTTATAAACTTTTTTTATTTTGGGTGAACTGCTCCAATTTAAAGTCTGAACATATAGCCCTTCCTAAATGAAACTGAGAATGTTGGTAGAATAAGAGACATGGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|