| Gene: Mtap7d1 | ID: uc008usy.1_intron_3_0_chr4_125910652_r | SPECIES: mm9 |
|
|
(3) OTHER.mut |
(1) OVARY |
(5) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(21) TESTES |
| TGGAGGAGATAATGAAGAGGACTCGGAAATCAGAAGCCGCCGAAACCAAGGTCAGGATTCTCAGGTTGGGGAGCGGGAGTTGGGGTGAGGAAAGGAGGCTGCAGAGAAGCCTCCAGAGCCGAGGAAGGATACAGTGAGGGAGGCTCTTCTGTGTCTGGGCCAAAAGGGAATTCAGTTCCGAGGTCAACGGGACCACATAGCCCTGGCACCTGATAGCTCTTCCTTTTCAAACCAGAAGCAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGCCCAGGTAAAGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTCAGGATTCTCAGGTTGGGGAGCGG................................................................................................................................................................................................................. | 26 | 1 | 16.00 | 16.00 | 4.00 | - | 2.00 | 4.00 | - | 2.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............TGAAGAGGACTCGGAAATCAGAAGCCGC..................................................................................................................................................................................................................................................... | 28 | 1 | 10.00 | 10.00 | 3.00 | 1.00 | - | 1.00 | - | 1.00 | 1.00 | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............TGAAGAGGACTCGGAAATCAGAAGCC....................................................................................................................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TGAAGAGGACTCGGAAATCAGAAGCCGCC.................................................................................................................................................................................................................................................... | 29 | 1 | 3.00 | 3.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............TGAAGAGGACTCGGAAATCAGAAGCCG...................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............GAAGAGGACTCGGAAATCAGAAGCCGC..................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........AATGAAGAGGACTCGGAAATCAGAAG......................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................TGCAAAGGAGACCGCAGCTAACAATTC............... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............GAAGAGGACTCGGAAATCAGAAGCCGCC.................................................................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............AGAGGACTCGGAAATCAGAAGCCGCCG................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....GGAGATAATGAAGAGGACTaa.................................................................................................................................................................................................................................................................... | 21 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................TCGGAAATCAGAAGCCGCCGAAACCAAt........................................................................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TAATGAAGAGGACTCGGAAATCAGAA.......................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TGAAGAGGACTCGGAAATCAGAAGC........................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......GATAATGAAGAGGACTCGGAAATCAGAAG......................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................CTCGGAAATCAGAAGCCGCCGAA................................................................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............AAGAGGACTCGGAAATCAGAAGCCGC..................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TGAAGAGGACTCGGAAATCAGAAGCCGta.................................................................................................................................................................................................................................................... | 29 | ta | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................CAGGATTCTCAGGTTGGGGAGCGGG................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTCAGGATTCTCAGGTTGGGGAGCG.................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............AGAGGACTCGGAAATCAGAAGCCGCC.................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTCAGGATTCTCAGGTTGGGGAGCGGGAGTTG........................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................GTCAGGATTCTCAGGTTGGGGAGCGGt................................................................................................................................................................................................................ | 27 | t | 1.00 | 16.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TTCTCAGGTTGGGGAGCGGGAGTTGGGGTGAG.................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........ATGAAGAGGACTCGGAAATCAGAAGCCG...................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................CAGAAGCCGCCGAAACCAAGaag........................................................................................................................................................................................................................................ | 23 | aag | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................GAGGACTCGGAAATCAGAAGCCGCCGAAA................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGAGGAGATAATGAAGAGGACTCGGAAATCAGAAGCCGCCGAAACCAAGGTCAGGATTCTCAGGTTGGGGAGCGGGAGTTGGGGTGAGGAAAGGAGGCTGCAGAGAAGCCTCCAGAGCCGAGGAAGGATACAGTGAGGGAGGCTCTTCTGTGTCTGGGCCAAAAGGGAATTCAGTTCCGAGGTCAACGGGACCACATAGCCCTGGCACCTGATAGCTCTTCCTTTTCAAACCAGAAGCAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGCCCAGGTAAAGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................TCCGAGGTCAACtca................................................................................................. | 15 | tca | 9.00 | 0.00 | - | 1.00 | - | - | 6.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................................................................................CACCTGATAGCTCTTCCTTTTCAA....................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................GGAAATCAGAAGCCGCCGAAACCAA............................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |