| Gene: Thrap3 | ID: uc008usv.1_intron_3_0_chr4_125849126_r.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| ATGGTTTGACTCATGAGGAATTGAAAAGTCCACGGGAACCTGGCTACAAGGTGAACTGTTGCTTTGATCAGTAATTTCAACAAAATGAGTGCGTTGGGCATGAACTTGACAGAAATGTGTTTGTTTAAATTACTCTCTACTTAAGTTTGTGTTTTTCTTTTAAGGATGGGCATAATTCTAAAAATGAACTACAAAGGGTTAATTTTTATTAAAATGTATCAACAACCTTTGTGAAGTGGTTAGAATATGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAACTGTTGCTTTGATCAGTAATTTCAACAAAATGAGTGCGTTGGGCATG.................................................................................................................................................... | 52 | 1 | 327.00 | 327.00 | 327.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTTGGGCATGAACTTGACA........................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................ACCTTTGTGAAGTGGTTAGAATATGGtat | 29 | tat | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............ATGAGGAATTGAAAAGTCCACGGGAACCTGta.............................................................................................................................................................................................................. | 32 | ta | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................AAAGTCCACGGGAACCTGGCT............................................................................................................................................................................................................. | 21 | 2 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TACTTAAGTTTGTGTTTTTCTTTTAAG...................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................AAGGATGGGCATAATTCTAAAAATGAACTA........................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................CTCTCTACTTAAGTTTGTGTTTTTCTTTTAAt...................................................................................... | 32 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TATCAACAACCTTTGTGAAGTGGTTAGAAT.... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................TGGGCATAATTCTAAAAATGAACTACAAAG...................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................ACCTTTGTGAAGTGGTTAGAATATGG | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................TTGAAAAGTCCACGGGAACCTGGCTAC........................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| .............TGAGGAATTGAAAAGTCCACGGGAACCT................................................................................................................................................................................................................. | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ........................AAAGTCCACGGGAACCTGGC.............................................................................................................................................................................................................. | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| .............................................................................................TTGGGCATGAACTTGAC............................................................................................................................................ | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| ....................................................................................................TGAACTTGACAGAAA....................................................................................................................................... | 15 | 18 | 0.06 | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.06 |
| ATGGTTTGACTCATGAGGAATTGAAAAGTCCACGGGAACCTGGCTACAAGGTGAACTGTTGCTTTGATCAGTAATTTCAACAAAATGAGTGCGTTGGGCATGAACTTGACAGAAATGTGTTTGTTTAAATTACTCTCTACTTAAGTTTGTGTTTTTCTTTTAAGGATGGGCATAATTCTAAAAATGAACTACAAAGGGTTAATTTTTATTAAAATGTATCAACAACCTTTGTGAAGTGGTTAGAATATGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................TTTGTGTTTTTCTTTTAaaaa........................................................................................ | 21 | aaaa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |