| Gene: Dnali1 | ID: uc008urp.1_intron_4_0_chr4_124742285_r | SPECIES: mm9 |
|
|
(1) OTHER.ip |
(3) OTHER.mut |
(3) PIWI.ip |
(3) PIWI.mut |
(19) TESTES |
| ATGACACCCCGGTGTTGGTGAGCCGGAATACAGAGAAACGGAGCCCCACGGTATGAACAGGCGTCTCAGGGGACGCGAGATCCTACAAACTCCCATGGGGAAAAGACATCCCAGCTTTGAGGATCTCTGGAATTTCAGGGGACAGATTGCTGGGGCTGACAGCCAAGGGAATTGGGACAGGGATGGAGGTTGGGAGAAGAGAACAAGAAGCCTAGCTATGACCTTAGAGGACAAATTTAAGATGAGAAAAGTCACATGGAAAAGATGGGGTTTGTGGTAGTCAAGTCCAAGAAGAGGTCTGGTAGTGACTTACCTTCGTCTAGAGAGTCAGAACAGAGGCCTGACCACTCATTCTAGAAACACCAGTTCAAACACAGGGTCAGAGCCAGATATCCCTCGTGGGATATCTCCAGCTCATATTTCCTTTAAGATCACAGATGAGGGAAATAGGCTGGAAATGGGGACGGCTGTACAAGAGACCTAGGAAAATCTGGAGGTACTAGACTGATCAACCTGTCTCTTCTTAGGCTCGGCCACTGAAAGTCACCATCCAGCAGCCTGGACCCTCTAGTACAAG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGATCACAGATGAGGGAAATAGGC............................................................................................................................. | 26 | 1 | 12.00 | 12.00 | 8.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCCACTGAAAGTCACCATCCAGCA..................... | 27 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TGGAATTTCAGGGGACAGATTGCTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .TGACACCCCGGTGTTGGTGAGCCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............TGGTGAGCCGGAATACAGAGAAACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGATCACAGATGAGGGAAATAGGCT............................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................TAGAGAGTCAGAACAGAGGCCTGACC....................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAATCTGGAGGTACTAGACTGA..................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................TTCAAACACAGGGTCAGAGCCAGATA......................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................GGAATTTCAGGGGACAGATTGCTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGACCTAGGAAAATCTGGAGG................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................ACAGCCAAGGGAAcgac.................................................................................................................................................................................................................................................................................................................................................................................................................. | 17 | cgac | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................ACAGCCAAGGGAAcgcc.................................................................................................................................................................................................................................................................................................................................................................................................................. | 17 | cgcc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TGACACCCCGGTagc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 15 | agc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................TCTCTGGAATTTCAGGGGACAGATTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................GAAACGGAGCCCCACGGTATGAACAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TGGAGGTTGGGAGAAGAGAACAAGA................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TGGTGAGCCGGAATACAGAGAAACGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGATCACAGATGAGGGAAATAGGa............................................................................................................................. | 26 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATCTGGAGGTACTAGACTGATC................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAAAATCTGGAGGTACTAGACTGA..................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................ACAGCCAAGGGAAcgga.................................................................................................................................................................................................................................................................................................................................................................................................................. | 17 | cgga | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCTGGAAATGGGGACGGCTGTAC........................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................................................................................................................................................TGGAGGTTGGGAGAAGAGAACAAGAAGC.............................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............TGGTGAGCCGGAATACAGAGAAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............TGGTGAGCCGGAATACAGAGAAACGGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGAGACCTAGGAAAAT....................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................AGATTGCTGGGGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................... | 15 | 16 | 0.06 | 0.06 | - | - | - | - | - | - | - | - | - | - | - | 0.06 | - | - | - | - | - | - | - |
| ATGACACCCCGGTGTTGGTGAGCCGGAATACAGAGAAACGGAGCCCCACGGTATGAACAGGCGTCTCAGGGGACGCGAGATCCTACAAACTCCCATGGGGAAAAGACATCCCAGCTTTGAGGATCTCTGGAATTTCAGGGGACAGATTGCTGGGGCTGACAGCCAAGGGAATTGGGACAGGGATGGAGGTTGGGAGAAGAGAACAAGAAGCCTAGCTATGACCTTAGAGGACAAATTTAAGATGAGAAAAGTCACATGGAAAAGATGGGGTTTGTGGTAGTCAAGTCCAAGAAGAGGTCTGGTAGTGACTTACCTTCGTCTAGAGAGTCAGAACAGAGGCCTGACCACTCATTCTAGAAACACCAGTTCAAACACAGGGTCAGAGCCAGATATCCCTCGTGGGATATCTCCAGCTCATATTTCCTTTAAGATCACAGATGAGGGAAATAGGCTGGAAATGGGGACGGCTGTACAAGAGACCTAGGAAAATCTGGAGGTACTAGACTGATCAACCTGTCTCTTCTTAGGCTCGGCCACTGAAAGTCACCATCCAGCAGCCTGGACCCTCTAGTACAAG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTAGGCTCGGCCACTGAAAGT................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................ACAAACTCCCATGGtgca............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | tgca | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................GCTCATATTTCCTTTAAGATCACAGA........................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |