| Gene: Ppie | ID: uc008uow.1_intron_5_0_chr4_122812921_r.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(10) TESTES |
| TACACTTTGCATTTCCTTGGCAGGATGCGGCAGCAGCTATCGACAACATGGTATGGCTGGGGATCCTCATTCTAACTGAAGGTGCCTTTCGCTGGTACAGTGGGCCCTTGTTCAGATACTGGTATTCTGAATTTCTGAAGTGTCAGGATTGGGTGGGGAGGTAAAGGTTACCTTCAAGTAAAAACATCCACTGTGGGCTGGTCAGTAGTAAAATTGGTTCCCGCCCAGACGCCTCCCCGTTACTTGAGCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................AGGATTGGGTGGGGAGGTAAAGGTTACCTTCAAGTAAAAACATCCACTGTGG...................................................... | 52 | 1 | 29.00 | 29.00 | 29.00 | - | - | - | - | - | - | - | - | - |
| .........................TGCGGCAGCAGCTATCGACAACATGaat..................................................................................................................................................................................................... | 28 | aat | 3.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | 1.00 | - |
| .................................CAGCTATCGACAACATG........................................................................................................................................................................................................ | 17 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................AGTAAAAACATCCACTGTGGG..................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................CGGCAGCAGCTATCGACAACATGaatg.................................................................................................................................................................................................... | 27 | aatg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................GCTATCGACAACATGGTATGGCTGG.............................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| TACACTTTGCATTTCCTTGGCAGGATGCGGCAGCAGCTATCGACAACATGGTATGGCTGGGGATCCTCATTCTAACTGAAGGTGCCTTTCGCTGGTACAGTGGGCCCTTGTTCAGATACTGGTATTCTGAATTTCTGAAGTGTCAGGATTGGGTGGGGAGGTAAAGGTTACCTTCAAGTAAAAACATCCACTGTGGGCTGGTCAGTAGTAAAATTGGTTCCCGCCCAGACGCCTCCCCGTTACTTGAGCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................TAAAAACATCCACTGTaaag........................................................ | 20 | aaag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| ....................................................................................................................TACTGGTATTCTGAATTTCTGAAGTGTCA......................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................GTGTCAGGATTGGGTgggg................................................................................................ | 19 | gggg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................GTGTCAGGATTGGGTgg................................................................................................ | 17 | gg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - |