| Gene: 1700041C02Rik | ID: uc008umd.1_intron_9_0_chr4_119032343_r.3p | SPECIES: mm9 |
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(1) OTHER.ip |
(3) OTHER.mut |
(6) PIWI.ip |
(1) PIWI.mut |
(21) TESTES |
| TCCCATGATTCACTGGCCTTTGCACGCCAGTGTAGAGAAGCTTCTGATTACAGGAGCACCACCATGCACGGTGTAGAAGCATCGTTTGTTGTAGGTGACGGAACTAACTCCGGAAGCCCTCGTCCGTGAGCCCCCAGATCCCCACACACCGCCGGCGGTGCTCTCTCAAGCGCCTTTCTCTCTTACAATGTTTGCCTCAGTATCTAACATCTGGAGAGAAAACAAGCTGCCAGCACCAAGGGGAACTGCG ....................................................................................................((((...(((((((........)))).)))..........................((((((......))))))...............))))......................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................GAAGCATCGTTTGTTGTAGGTGACGG..................................................................................................................................................... | 26 | 1 | 7.00 | 7.00 | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - |
| ...........................................................................GAAGCATCGTTTGTTGTAGGTGACGGA.................................................................................................................................................... | 27 | 1 | 7.00 | 7.00 | - | - | - | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | 1.00 |
| .........................................................................TAGAAGCATCGTTTGTTGTAGGTG......................................................................................................................................................... | 24 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................AAGCATCGTTTGTTGTAGGTGACGGA.................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................TAGAAGCATCGTTTGTTGTAGGTGA........................................................................................................................................................ | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................GAAGCATCGTTTGTTGTAGGTGACGGAAa.................................................................................................................................................. | 29 | a | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................GAAGCATCGTTTGTTGTAGGTGACGGAA................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................ATGCACGGTGTAGAAGCA......................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TAGAAGCATCGTTTGTTGTAGGcga........................................................................................................................................................ | 25 | cga | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................AACTCCGGAAGCCCTCGTCCGTGAGC....................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TCTAACATCTGGAGAGAAAACAAGCTGaa................... | 29 | aa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................AAGCATCGTTTGTTGTAGGTGACGGAAC.................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................GTAGAAGCATCGTTTGTTGTAGGTGAC....................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................................TCTGGAGAGAAAACAAGCTGCCAGCACC............. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................AGGTGACGGAACTAACTCC........................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TAACATCTGGAGAGAAAACAAGCTGC.................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| TCCCATGATTCACTGGCCTTTGCACGCCAGTGTAGAGAAGCTTCTGATTACAGGAGCACCACCATGCACGGTGTAGAAGCATCGTTTGTTGTAGGTGACGGAACTAACTCCGGAAGCCCTCGTCCGTGAGCCCCCAGATCCCCACACACCGCCGGCGGTGCTCTCTCAAGCGCCTTTCTCTCTTACAATGTTTGCCTCAGTATCTAACATCTGGAGAGAAAACAAGCTGCCAGCACCAAGGGGAACTGCG ....................................................................................................((((...(((((((........)))).)))..........................((((((......))))))...............))))......................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................TCTCTCAAGCGCCTTac.......................................................................... | 17 | ac | 5.00 | 0.00 | - | - | 1.00 | - | - | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCTCTCAAGCGCCTTact.......................................................................... | 18 | act | 3.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................TCTCTCAAGCGCCTagtg........................................................................... | 18 | agtg | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCTCTCAAGCGCCTact........................................................................... | 17 | act | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TCTCTCAAGCGCCTTactc.......................................................................... | 19 | actc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................TCTCTCAAGCGCCTTacga.......................................................................... | 19 | acga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TCTCTCAAGCGCCTactc........................................................................... | 18 | actc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |