| Gene: Cdc20 | ID: uc008ukc.1_intron_2_0_chr4_118107482_r.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(12) TESTES |
| GCTGGGTGTTAGGCATCAGAGCTGGGTTAGAATAGATGAGAACCCTGCCCAGCTATAGTGCAAGAAGCTCTTTAATACATATTCCAGGTTTCTGTGCCATTTCAAGGGAAAGGAGGGCATGGAAAAGCTCAGTTCTTTTACACGTAGGGCTGCTTCTGCCTCTCTGTTGACCTGACCCAGCCTTTATCCATTCCACCCAGGCTGTGGCATGGTGTCCCTGGCAGTCCAATATCCTGGCAACAGGAGGAGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................CTATAGTGCAAGAAGCTCTTTAATACATATTCCAGGTTTCTGTGCCATTTCA.................................................................................................................................................. | 52 | 1 | 102.00 | 102.00 | 102.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................TAGAATAGATGAGAACCCTGCCCAGC..................................................................................................................................................................................................... | 26 | 2 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................ATCCTGGCAACAGGAacg.. | 18 | acg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................CTTTTACACGTAGGGCTGCTTCTGCCTC........................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGCTGTGGCATGGTGTC.................................. | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGGCAGTCCAATATCCTGGCAACAGGAGGAG. | 31 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ...........................TAGAATAGATGAGAACCCTGCCCAGCT.................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| .........................................................................................................................................................................................................................CTGGCAGTCCAATATCCTGGCAA.......... | 23 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGGCAGTCCAATATCCTGGCAACAGGAGGAGG | 32 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| GCTGGGTGTTAGGCATCAGAGCTGGGTTAGAATAGATGAGAACCCTGCCCAGCTATAGTGCAAGAAGCTCTTTAATACATATTCCAGGTTTCTGTGCCATTTCAAGGGAAAGGAGGGCATGGAAAAGCTCAGTTCTTTTACACGTAGGGCTGCTTCTGCCTCTCTGTTGACCTGACCCAGCCTTTATCCATTCCACCCAGGCTGTGGCATGGTGTCCCTGGCAGTCCAATATCCTGGCAACAGGAGGAGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................CTGCTTCTGCCTCTCTGtag.................................................................................... | 20 | tag | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................................................GGTGTCCCTGGCAGTCCAATATCCctg................ | 27 | ctg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................GGTGTCCCTGGCAGTCCAATATCCTG.............. | 26 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................GCAGTCCAATATCCTGGCAACAGGAGGA.. | 28 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................GGTGTCCCTGGCAGTCCAATATCCTGGCA........... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 |