| Gene: Orc1l | ID: uc008ubh.1_intron_15_0_chr4_108285762_f.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| GCGTGAATGACTGTTTTGTCACTGGGTCTTAACTATGTAGCCTTGGTTGTCCTGAGGCTCACAAAGTCTCCTGGCCTCTGGCCTCTGCCTCCCAAGTGCATGGACTATCAGGTGCTCCATTTTTGCAAAAGATGATCAGATAAAAGCCCGGGATTATTGTCTTTCCTAACCTTTACTTCACTTTCACTTTTGCTGTCTAGATATACAGTCAGCACGTGGCTCTGTGCCGAATGGAGGGACTGCCATACCC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................TTGCAAAAGATGATCAGATAAAAGCCCGGGATTATTGTCTTTCCTAACCTTT............................................................................ | 52 | 1 | 25.00 | 25.00 | 25.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGTGCCGAATGGAGGGACTGCCATACC. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GATATACAGTCAGCACGTGGCTCTGTGt....................... | 28 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................................................................................TGTCTAGATATACAGgat....................................... | 18 | gat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................................................................................................................TGTGCCGAATGGAGGGACTGCCATA... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGTGCCGAATGGAGGGACTGCCATACCC | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GTGGCTCTGTGCCGAATGGAGGGgct......... | 26 | gct | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TACAGTCAGCACGTGGC.............................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TCTGTGCCGAATGGAGGGACTGCCATA... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| GCGTGAATGACTGTTTTGTCACTGGGTCTTAACTATGTAGCCTTGGTTGTCCTGAGGCTCACAAAGTCTCCTGGCCTCTGGCCTCTGCCTCCCAAGTGCATGGACTATCAGGTGCTCCATTTTTGCAAAAGATGATCAGATAAAAGCCCGGGATTATTGTCTTTCCTAACCTTTACTTCACTTTCACTTTTGCTGTCTAGATATACAGTCAGCACGTGGCTCTGTGCCGAATGGAGGGACTGCCATACCC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................ACTTTCACTTTTGCTGTCTAGATATACAt........................................... | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................TCTGGCCTCTGCCTCCCAAata........................................................................................................................................................... | 22 | ata | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................GCTCCATTTTTGCAAAAGATGATCAGA.............................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................................GCTGTCTAGATATACAGTCAGCACGTG................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................ATCAGGTGCTCCATTTTTGCAAAggtc......................................................................................................................... | 27 | ggtc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........CTGTTTTGTCACTGGGTCTTAACTATGTA................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TACTTCACTTTCACTTTTGCTGTCTAGATA............................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |