| Gene: Echdc2 | ID: uc008uat.1_intron_2_0_chr4_107842554_f.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(13) TESTES |
| AGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTTCTGTGCAGGTGGGTGCCCAGTCACCCTCTCCTCTTCAGGGACTGGAATGCCTTAGGGCTCTGGCATAGGACAGGTTCCCATTTGACAATATGAACGCACTTGAAGACACAGGCAGGTGAAGTTCCTCGCCAAGTTTGGTTTACACAGCTTAGTGAGGGAAGGGAGAGAGTGAGATTCAGTTTGAACTTGGCCTCTCTGACCCATATCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ............................................................................................................................................CTTGAAGACACAGGCAG............................................................................................. | 17 | 1 | 23.00 | 23.00 | 7.00 | 15.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................AGGGAGTGTTCTGTGCAG........................................................................................................................................................................................................ | 18 | 1 | 13.00 | 13.00 | 13.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................ACTTGAAGACACAGGCAG............................................................................................. | 18 | 1 | 11.00 | 11.00 | - | 10.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................TATGAACGCACTTGAAGACACAGGCAG............................................................................................. | 27 | 1 | 5.00 | 5.00 | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - |
| .................................GGGAGTGTTCTGTGCAG........................................................................................................................................................................................................ | 17 | 2 | 5.00 | 5.00 | 4.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................ATGAACGCACTTGAAGACACAGGCAG............................................................................................. | 26 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - |
| ..............................GAAGGGAGTGTTCTGTGCAG........................................................................................................................................................................................................ | 20 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................CGCACTTGAAGACACAG................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................GAATGCCTTAGGGCTCTGGCATAGGACA........................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................................................................................TGAGATTCAGTTTGctgt..................... | 18 | ctgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................ACAATATGAACGCACTTGAAGACACAGGC............................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................TTTGACAATATGAACGCACTTGAAGACACAGGCAG............................................................................................. | 35 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................TCTGTGCAGGTGGGggtg............................................................................................................................................................................................... | 18 | ggtg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........TGCTCTTCAGAAGTGCGGTGAAGGGAGT................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| AGTCCGGGTCCTGCTCTTCAGAAGTGCGGTGAAGGGAGTGTTCTGTGCAGGTGGGTGCCCAGTCACCCTCTCCTCTTCAGGGACTGGAATGCCTTAGGGCTCTGGCATAGGACAGGTTCCCATTTGACAATATGAACGCACTTGAAGACACAGGCAGGTGAAGTTCCTCGCCAAGTTTGGTTTACACAGCTTAGTGAGGGAAGGGAGAGAGTGAGATTCAGTTTGAACTTGGCCTCTCTGACCCATATCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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