| Gene: Ssbp3 | ID: uc008tyx.1_intron_13_0_chr4_106712639_f.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.mut |
(13) TESTES |
| TCCTCCACTCAGCACTCAGCCCCGAGGCCCAACCAGCACCCAGTGCTTAAGTCTGCACAGGGAGACCCATCAGCCTGGAGCATCCTGGGTGCTCTGCTAAGCTGCTGGGACCTGAGGCCTGAGCCTTTGAAGGCATTTGGGAAGCAGAAAAGGGGTGCGAAGGGCCTGGGTCCACTAACCAAGCCCTGCTTACCCCACAGTTTCCAATGGGTCCTGGCTCAGACGGCCCAATGGGAGGCATGGGCGGCAT .......................................................................................................................................................((((((...(((((.(((.........))).)))))...))))))...................................................... ..............................................................................................................................................143......................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) |
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| ....................................................................................................................................................................................AAGCCCTGCTTACCCCACAGaga............................................... | 23 | aga | 4.00 | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................AAAAGGGGTGCGAAGGGCCTGGaa............................................................................... | 24 | aa | 2.00 | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................AAGCCCTGCTTACCCCACAGT................................................. | 21 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................TGCTAAGCTGCTGGGACCTGAGGC.................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................AAAAGGGGTGCGAAGGGCCTGG................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................AAAGGGGTGCGAAGGGCCT................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TGGGTCCTGGCTCAGACGG........................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................AAAGGGGTGCGAAGGGCCTGG................................................................................. | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................AAGCCCTGCTTACCCCACAG.................................................. | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................AAGGGGTGCGAAGGGCCTGGGT............................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................AGGGGTGCGAAGGGCCTGGtat.............................................................................. | 22 | tat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................AAGGGGTGCGAAGGGCCTGGGTtt............................................................................. | 24 | tt | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................................................................................AAAGGGGTGCGAAGGGCCTGGaatt............................................................................. | 25 | aatt | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................................................................................................................................................................................TCAGACGGCCCAATGGGAGGCATGGGCGGCA. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| TCCTCCACTCAGCACTCAGCCCCGAGGCCCAACCAGCACCCAGTGCTTAAGTCTGCACAGGGAGACCCATCAGCCTGGAGCATCCTGGGTGCTCTGCTAAGCTGCTGGGACCTGAGGCCTGAGCCTTTGAAGGCATTTGGGAAGCAGAAAAGGGGTGCGAAGGGCCTGGGTCCACTAACCAAGCCCTGCTTACCCCACAGTTTCCAATGGGTCCTGGCTCAGACGGCCCAATGGGAGGCATGGGCGGCAT .......................................................................................................................................................((((((...(((((.(((.........))).)))))...))))))...................................................... ..............................................................................................................................................143......................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) |
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