(6)
OTHER.mut
(1)
OVARY
(5)
PIWI.ip
(1)
PIWI.mut
(23)
TESTES

Sense strand
TCAGCACCTTCACAGAGGCCCCATACTCCAGACATCATTCGGTGGAACTGGTGAGCCTGCTTCCTTTCACGTGGTCTGTGTCCCGCCCCCAATACGCCCGCGCATGCTCCAACCGCGTCCCTTCCCCAATACACCTGCGCATGCTCCAACCCAAGCTTGCCTCATTCTTGGCTCCAGATGTTTGATAAACTCAGGACTATGCTAGAACCCTAGGAGTTTAAGGGCCGCAGGCTTCCTCTTCCACAGCTGTTTCTACTCTGTATTTCCCTGAAGTGGAACAAGGCCAGTCACAGAGGTGGTCAGGACTCGATCTTGAGTGCTGAGCTCCTCCTGGTCGTCAGACTGGGGAACTGTCTAGTTTAATTCCTAGGCCAGGGGTGACTTGCACATGCAAAGGGGTGGGGTAGGTGGTTATGACCGACTCAGCTGAGAGCCTGCTTTAACTTAGTCCCACATAGGACCTGGGACCTATAACTCCAAGGATACCTGCTTCAGCAA
..................................................................................................................................................................................................((((...((((....)))).))))...(((((...)))))(((((...((.(((..((((((((...........)).))))))...)))..))...)))))..........................................................................................................................................................................................................
..................................................................................................................................................................................................195....................................................................................................298......................................................................................................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
............................................................................................................................................................................................................................................................................TGAAGTGGAACAAGGCCAGTCACAGA............................................................................................................................................................................................................ 26 1 18.00 18.00 5.00 7.00 2.00 - - - - - - - 2.00 - - - - - - - - 1.00 - - 1.00 -
.......................................................................................................................................................................................................TGCTAGAACCCTAGGAGTTTAAGGGC................................................................................................................................................................................................................................................................................. 26 1 17.00 17.00 2.00 2.00 2.00 2.00 5.00 - 1.00 - - - - - 1.00 1.00 - - - - 1.00 - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACTCCAAGGATACCTGCTTCAGC.. 27 1 11.00 11.00 - 2.00 1.00 - 2.00 5.00 - - - - - - - - 1.00 - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTCCAAGGATACCTGCTTCAGC.. 25 1 5.00 5.00 - 5.00 - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................TGCTAGAACCCTAGGAGTTTAAGGGCCGC.............................................................................................................................................................................................................................................................................. 29 1 4.00 4.00 - 1.00 1.00 2.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................TACTCTGTATTTCCCTGAAGTGGAACA.......................................................................................................................................................................................................................... 27 1 3.00 3.00 - - - - - 3.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................TGAGTGCTGAGCTCCTCCTGGTCGTC............................................................................................................................................................... 26 1 3.00 3.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - 1.00
..........................................................................................................................................................................................................TAGAACCCTAGGAGTTTAAGGGCCGC.............................................................................................................................................................................................................................................................................. 26 1 3.00 3.00 2.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................TGTTTCTACTCTGTATTTCCCTGAAGT................................................................................................................................................................................................................................ 27 1 3.00 3.00 - - - 3.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTCCAAGGATACCTGCTTCAGCAtt 28 tt 2.00 0.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................TACTCTGTATTTCCCTGAAGTGGAACAAGGC...................................................................................................................................................................................................................... 31 1 2.00 2.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAGGGGTGGGGTAGGTGGTT..................................................................................... 24 1 2.00 2.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................TAGTTTAATTCCTAGGCCAGGGGTGA..................................................................................................................... 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................TAAGGGCCGCAGGCTTCCTCTT.................................................................................................................................................................................................................................................................. 22 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................TATGACCGACTCAGCTGAGAGCCTGCT........................................................... 27 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TGTTTGATAAACTCAGGACTATGCTAGA.................................................................................................................................................................................................................................................................................................... 28 1 2.00 2.00 - 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................TATGACCGACTCAGCTGAGAGCCTGCTTa......................................................... 29 a 2.00 0.00 - - - - - - - - 2.00 - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................TGCTAGAACCCTAGGAGTTTAAGGG.................................................................................................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
..........................................................................................................................................................................................AAACTCAGGACTATGCTAGAACCCTA.............................................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................GTGGAACAAGGCCAGTCACAGAGGTG........................................................................................................................................................................................................ 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................TGAGTGCTGAGCTCCTCCTGGTCGcc............................................................................................................................................................... 26 cc 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...................................................................................................................................................................................................................................................................................................................CGATCTTGAGTGCTGAGCTCCTCCTG..................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................TTAATTCCTAGGCCAGGGGTGACTTG................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGATACCTGCTTCAGCA. 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - -
.......................................................................................................................................................................................................TGCTAGAACCCTAGGAGTTTAAGGGCC................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.............................................................................................................................................TGCTCCAACCCAAGCTTGCCTCATTCT.......................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACCTATAACTCCAAGGATACCTGC........ 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................TTTGATAAACTCAGGACTATGCTAGA.................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
........................................................................................................................................................................................................................................................................................................................TTGAGTGCTGAGCTCCTCCTGGTCat................................................................................................................................................................ 26 at 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................TTCTACTCTGTATTTCCCTGAAGTG............................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................TAGTTTAATTCCTAGGCCAGGGGTGACa................................................................................................................... 28 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................TGCTAGAACCCTAGGAGTTTAAGG................................................................................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................TCTTGAGTGCTGAGCTCCTCCTGGTC.................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................TGAGTGCTGAGCTCCTCCTGGTCG................................................................................................................................................................. 24 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGCCTGCTTTAACTTAGTCCCA............................................. 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................TTGAGTGCTGAGCTCCTCCTGGTCGTC............................................................................................................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................................TGAGCTCCTCCTGGTCGTCAGACTGGGG...................................................................................................................................................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................CACAGAGGTGGTCAGGACTCGATCTT........................................................................................................................................................................................ 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAGGGGTGGGGTAGGTGGTat.................................................................................... 25 at 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................TCTGTATTTCCCTGAAGTGGAACAAGGC...................................................................................................................................................................................................................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................TACTCTGTATTTCCCTGAAGTGGAACAAG........................................................................................................................................................................................................................ 29 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGACCGACTCAGCTGAGAGCCTGCTT.......................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................TGAGTGCTGAGCTCCTCCTGGTCGTCt.............................................................................................................................................................. 27 t 1.00 3.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGCCTGCTTTAACTTAGTCCC.............................................. 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCAGCTGAGAGCCcctg........................................................... 20 cctg 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................GAAGTGGAACAAGGCCAGTCACAGAG........................................................................................................................................................................................................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCAGCTGAGAGCCTGCTT.......................................................... 21 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTTAGTCCCACATAGGACCTGG................................. 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................TATGCTAGAACCCTAGGAGTTTAAGGGC................................................................................................................................................................................................................................................................................. 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................GTGGAACAAGGCCAGTCACAGA............................................................................................................................................................................................................ 22 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.........................................................................................................................................................................................TAAACTCAGGACTATGCTAGAAacct............................................................................................................................................................................................................................................................................................... 26 acct 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGACCTGGGACCTATAACTCCAAG................. 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................TGGAACAAGGCCAGTCACAGAGGTGG....................................................................................................................................................................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTATGACCGACTCAGCTGAGAGCCTGC............................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
TCAGCACCTTCACAGAGGCCCCATACTCCAGACATCATTCGGTGGAACTGGTGAGCCTGCTTCCTTTCACGTGGTCTGTGTCCCGCCCCCAATACGCCCGCGCATGCTCCAACCGCGTCCCTTCCCCAATACACCTGCGCATGCTCCAACCCAAGCTTGCCTCATTCTTGGCTCCAGATGTTTGATAAACTCAGGACTATGCTAGAACCCTAGGAGTTTAAGGGCCGCAGGCTTCCTCTTCCACAGCTGTTTCTACTCTGTATTTCCCTGAAGTGGAACAAGGCCAGTCACAGAGGTGGTCAGGACTCGATCTTGAGTGCTGAGCTCCTCCTGGTCGTCAGACTGGGGAACTGTCTAGTTTAATTCCTAGGCCAGGGGTGACTTGCACATGCAAAGGGGTGGGGTAGGTGGTTATGACCGACTCAGCTGAGAGCCTGCTTTAACTTAGTCCCACATAGGACCTGGGACCTATAACTCCAAGGATACCTGCTTCAGCAA
..................................................................................................................................................................................................((((...((((....)))).))))...(((((...)))))(((((...((.(((..((((((((...........)).))))))...)))..))...)))))..........................................................................................................................................................................................................
..................................................................................................................................................................................................195....................................................................................................298......................................................................................................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
............AGGCCCCATACTCCAGACATCAata............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 25 ata 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...CCTTCACAGAGGCCCCATACTCggc...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 ggc 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...........................................GGAACTGGTGAGCCTGCTTCCTTTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
................................................GAGCCTGCTTCCTTggga................................................................................................................................................................................................................................................................................................................................................................................................................................................ 18 ggga 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - -