| Gene: Raver2 | ID: uc008tvi.1_intron_4_0_chr4_100793185_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| GCAAGCCTGTGTTTGGCGCTTGGCACTAAAAGACAGAAAGTGCTGGAATTCTAAAACAAATTCCAGGATCGAATTGCCAGGAGATGCTGAAACGTACCGTGCGGGTTAAAGGGTGTAAAAGAAATGTTTTTGGAACATGTATTTTGAATTTCTTGTCACGTGGTTACGGTTTTCTGTCGACTGACTGATCTTCTCTACAGTTCTCGGAGTCGCGCCCAGCTTATCTCACCTGCTGAGTCCGTCACTCCCC ...............................................................(((.(((............))).)))...((((((..(((.....(((((..(((((...((((((...))))))...)))))...)))))....)))))).))).................................................................................. .......................................................56.....................................................................................................................175......................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
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| ............................................................TTCCAGGATCGAATTGCCAGGAGATGC................................................................................................................................................................... | 27 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................TGATCTTCTCTACAGTTCTCGGAGTC....................................... | 26 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGAATTTCTTGTCACGTGGTTACGGTT............................................................................... | 27 | 1 | 4.00 | 4.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGAAACGTACCGTGCGGGTTAAAGGGT........................................................................................................................................ | 27 | 1 | 3.00 | 3.00 | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................TAAAAGACAGAAAGTGCTGGAATTCTAAA................................................................................................................................................................................................... | 29 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ..........................................................................TGCCAGGAGATGCTGAAACGTACCGT...................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................GGATCGAATTGCCAGGAGATGCTGAA............................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................TAAAAGACAGAAAGTGCTGGAATTCT...................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TATCTCACCTGCTGAGTCCGTCACTCCC. | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TGACTGATCTTCTCTACAGTTCTCGGA.......................................... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TGGTTACGGTTTTCTGTCGACTGACTG............................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TCGGAGTCGCGCCCAGCTTATCTCACC.................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................ACAGTTCTCGGAGaaac..................................... | 17 | aaac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................TAAAAGACAGAAAGTGCTGGAATTCTA..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................ATCGAATTGCCAGGAGATGCTGAAACGT........................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TTACGGTTTTCTGTCGACTGACTGATC............................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TTAAAGGGTGTAAAAGAAATGTTTTT....................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................CAGAAAGTGCTGGAATTCTAAAACAA............................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TCTCTACAGTTCTCGGAGTCGCGCCC................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TGACTGATCTTCTCTACAGTTCTCGG........................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................TGATCTTCTCTACAGTTCTCGGAttc....................................... | 26 | ttc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................TACGGTTTTCTGTCGACTGACTGATC............................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TAAAAGACAGAAAGTGCTGGAATTag...................................................................................................................................................................................................... | 26 | ag | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TTGCCAGGAGATGCTGAAACGTACCG....................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................TTGCCAGGAGATGCTGAAACGTACCGTGC.................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................AAAAGACAGAAAGTGCTGGAA.......................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................................................................................TGACTGATCTTCTCTACAGTTCTCGGAG......................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TGCCAGGAGATGCTGAAACGTACCGTGt.................................................................................................................................................... | 28 | t | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TTCCAGGATCGAATTGCCAGGAGATGCTG................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................AAGGGTGTAAAAGAAAggct.......................................................................................................................... | 20 | ggct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................TTGAATTTCTTGTCACGTGGTTACGGT................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TACAGTTCTCGGAGTCGCGCCCAGCT............................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................TGTCACGTGGTTACGGTTTTCTGTCG....................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TTGGAACATGTATTTTGAATTTCTTttc............................................................................................. | 28 | ttc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................................TTTGAATTTCTTGTCACGTGGTTACGGTT............................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TCTCACCTGCTGAGTCCGTCACTCCCC | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTCACGTGGTTACGGTTTTCTGTC........................................................................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TACAGTTCTCGGAGTCGCGCCCAGC.............................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TTAAAGGGTGTAAAAGAAATGTTTTTG...................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTCACGTGGTTACGGTTTTCTGTCGACT.................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TCTTCTCTACAGTTCTCGGAGTCGCGC................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGTCACGTGGTTACGGTTTTCTGTCGt...................................................................... | 27 | t | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................TCGAATTGCCAGGAGATGCTGAAACGT........................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TGCCAGGAGATGCTGAAACGTACCGTG..................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TTGAATTTCTTGTCACGTGGTTACGGTT............................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................GAATTTCTTGTCACGTGGTTACGGTT............................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| GCAAGCCTGTGTTTGGCGCTTGGCACTAAAAGACAGAAAGTGCTGGAATTCTAAAACAAATTCCAGGATCGAATTGCCAGGAGATGCTGAAACGTACCGTGCGGGTTAAAGGGTGTAAAAGAAATGTTTTTGGAACATGTATTTTGAATTTCTTGTCACGTGGTTACGGTTTTCTGTCGACTGACTGATCTTCTCTACAGTTCTCGGAGTCGCGCCCAGCTTATCTCACCTGCTGAGTCCGTCACTCCCC ...............................................................(((.(((............))).)))...((((((..(((.....(((((..(((((...((((((...))))))...)))))...)))))....)))))).))).................................................................................. .......................................................56.....................................................................................................................175......................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
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