| Gene: Atg4c | ID: uc008tuu.1_intron_9_0_chr4_98901878_f.5p | SPECIES: mm9 |
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(2) PIWI.mut |
(1) TDRD1.ip |
(9) TESTES |
| ACTGTCGAAATGTCCAGGACTTTGAACGAGCGTCTGAAGAAATCACTAAGGTACCTTATTAAAATCACTATGTAACAGTGTTGTAAATTACATGATTTCTATTCCATGATAATAAATGTGTAAATTGTCACATGTATAAATGTGTAAATTGTCACATGTACATACAAGTAACATTCCTCCTTGAATGTTTCTATTACTAACTGGGGAGCCAGTGTTTGAGATAGATGGAGCCAGTGACTAGTTAAAAATA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................TAAATGTGTAAATTGTCACATGTACATACAAGTAACATTCCTCCTTGAATGT.............................................................. | 52 | 1 | 148.00 | 148.00 | 148.00 | - | - | - | - | - | - | - | - |
| ....................TTTGAACGAGCGTCTGA..................................................................................................................................................................................................................... | 17 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - |
| ...............AGGACTTTGAACGAGCGTCTGAAGAAATC.............................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| .....CGAAATGTCCAGGACTTTGAACGAGCGTC........................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| .......AAATGTCCAGGACTTTGAACGA............................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| ............TCCAGGACTTTGAACGAGCGTCTGAAGAAATC.............................................................................................................................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ....................TTTGAACGAGCGTCTGAAGAAATCACTA.......................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| .........ATGTCCAGGACTTTGAACGAGCGTCTGAA.................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ACTGTCGAAATGTCCAGGACTTTGAACGAGCGTCTGAAGAAATCACTAAGGTACCTTATTAAAATCACTATGTAACAGTGTTGTAAATTACATGATTTCTATTCCATGATAATAAATGTGTAAATTGTCACATGTATAAATGTGTAAATTGTCACATGTACATACAAGTAACATTCCTCCTTGAATGTTTCTATTACTAACTGGGGAGCCAGTGTTTGAGATAGATGGAGCCAGTGACTAGTTAAAAATA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................GCCAGTGTTTGAGATgtt............................ | 18 | gtt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................ACAGTGTTGTAAATagga.................................................................................................................................................................. | 18 | agga | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - |