(6)
OTHER.mut
(2)
OVARY
(4)
PIWI.ip
(3)
PIWI.mut
(22)
TESTES

Sense strand
CGGATCGCCTGATCTCCTTCAGTCTGTGCCTAAACACTGTGAAGGAAGAAAGTTCATAAACTCATAGGGCACACTGTCCCCCTATCGGATGGGCAAGGACAGTACCACTGTCAACATGTCCTGAGCGCTTCTTGGGTACTAGGTTCGGTCCCTGTCGCCAAACATAATGACCAGACATTATTTTCTTTCTCCTCTCCTAGCTCTAAGACTCACGCCCTACTCTCCTGCCCTCCACTGCTCGCCCCGGGCT


Size Perfect hit Total Norm Perfect Norm GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT4()
Testes Data. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
................................................................TAGGGCACACTGTCCCCCTATCGGATG............................................................................................................................................................... 27 1 9.00 9.00 - 9.00 - - - - - - - - - - - - - - - - - - - - - -
..............................TAAACACTGTGAAGGAAGAAAGTTCATA................................................................................................................................................................................................ 28 1 2.00 2.00 - - - - 1.00 - - - - - - - - - 1.00 - - - - - - - - -
..............................TAAACACTGTGAAGGAAGAAAGTTCA.................................................................................................................................................................................................. 26 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................TAGCTCTAAGACTCACGCCCTACTC............................ 25 1 2.00 2.00 - - - - - 2.00 - - - - - - - - - - - - - - - - - -
................................................................TAGGGCACACTGTCCCCCTATCGGATGG.............................................................................................................................................................. 28 1 2.00 2.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - -
....................................................................................TCGGATGGGCAAGGACAGTACCACTGT........................................................................................................................................... 27 1 2.00 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................TCCCTGTCGCCAAACATAATGACCAGACA......................................................................... 29 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - -
.....................................TGTGAAGGAAGAAAGTTCATAAACTCA.......................................................................................................................................................................................... 27 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................TAAGACTCACGCCCTACTCTCCTGC...................... 25 1 2.00 2.00 - - - - - - 2.00 - - - - - - - - - - - - - - - - -
....................AGTCTGTGCCTAAACACTGTGAAGGAAGt......................................................................................................................................................................................................... 29 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
............................................................................TCCCCCTATCGGATGGGCAAGGACAGT................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................TGGGCAAGGACAGTACCACTGTCAACATGTCC................................................................................................................................. 32 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................TAAACACTGTGAAGGAAGAAAGTT.................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
............................................................................................................TGTCAACATGTCCTGAGCGCTTCTTGGGTA................................................................................................................ 30 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
............................................................................................................TGTCAACATGTCCTGAGCGCTTCTTGG................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................TGTGCCTAAACACTGTGAAGGAAGAAAGTT.................................................................................................................................................................................................... 30 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.......................CTGTGCCTAAACACTGTGAAGGAAGA......................................................................................................................................................................................................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................AAAGTTCATAAACTCATAGGGCACAC................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
....................................................................................TCGGATGGGCAAGGACAGTACCACTG............................................................................................................................................ 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...................................................................................................................................TTGGGTACTAGGTTCGGTCCCTGTCGCC........................................................................................... 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................TAAACACTGTGAAGGAAGAAAGatt................................................................................................................................................................................................... 25 att 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..............................TAAACACTGTGAAGGAAGAAAGTTC................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..............................TAAACACTGTGAAGGAAGAAAGTTCAT................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
........................TGTGCCTAAACACTGTGAAGGAAGAAA....................................................................................................................................................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................TAAACACTGTGAAGGAAGAAAG...................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
......................................................................................GGATGGGCAAGGACAGTACCAC.............................................................................................................................................. 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - -
........................TGTGCCTAAACACTGTGAAGGAAGAca....................................................................................................................................................................................................... 27 ca 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
............................................................................................................TGTCAACATGTCCTGAGCGCTTCTTGGG.................................................................................................................. 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................TAGCTCTAAGACTCACGCCCTACTCTCC......................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - -
............................................................................................................TGTCAACATGTCCTGAGCGCTTCTTtgg.................................................................................................................. 28 tgg 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -

Antisense strand
CGGATCGCCTGATCTCCTTCAGTCTGTGCCTAAACACTGTGAAGGAAGAAAGTTCATAAACTCATAGGGCACACTGTCCCCCTATCGGATGGGCAAGGACAGTACCACTGTCAACATGTCCTGAGCGCTTCTTGGGTACTAGGTTCGGTCCCTGTCGCCAAACATAATGACCAGACATTATTTTCTTTCTCCTCTCCTAGCTCTAAGACTCACGCCCTACTCTCCTGCCCTCCACTGCTCGCCCCGGGCT


Size Perfect hit Total Norm Perfect Norm GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT4()
Testes Data. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
......GCCTGATCTCCTTCAGTCTGTGCCTA.......................................................................................................................................................................................................................... 26 1 11.00 11.00 1.00 5.00 - - - - 2.00 - - - - - - - - 3.00 - - - - - - - -
.....CGCCTGATCTCCTTCAGTCTGTGCCTA.......................................................................................................................................................................................................................... 27 1 8.00 8.00 1.00 - - - - 5.00 - - - - - - 1.00 - - - - - 1.00 - - - - -
.............................................................................................................................................................................................TCCTCTCCTAGCTCTAAGACTCACGC................................... 26 1 5.00 5.00 - - - - - - 5.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................TTTTCTTTCTCCTCTCCTAGCTCTAA............................................ 26 1 4.00 4.00 1.00 3.00 - - - - - - - - - - - - - - - - - - - - - -
..GATCGCCTGATCTCCTTCAGTCTGTGCC............................................................................................................................................................................................................................ 28 1 4.00 4.00 - - - - - - - 1.00 - - - - - 2.00 - - - - - - - 1.00 - -
.....CGCCTGATCTCCTTCAGTCTGTGCCTAAA........................................................................................................................................................................................................................ 29 1 3.00 3.00 - - - - - 3.00 - - - - - - - - - - - - - - - - - -
....TCGCCTGATCTCCTTCAGTCTGTGCC............................................................................................................................................................................................................................ 26 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - -
............TCTCCTTCAGTCTGTGCCTAAACACTGT.................................................................................................................................................................................................................. 28 1 2.00 2.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
..................................................................................................................CATGTCCTGAGCGCTTCTTGGGTACTA............................................................................................................. 27 1 2.00 2.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
..................................................................................................CAGTACCACTGTCAACATGTCCTGAGCGCa.......................................................................................................................... 30 a 2.00 0.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - -
....................................................................CACACTGTCCCCCTATCGGAa................................................................................................................................................................. 21 a 2.00 0.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - -
................................................................................................................AACATGTCCTGAGCGCTTCTTGGGTA................................................................................................................ 26 1 2.00 2.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
......................................................................ACACTGTCCCCCTATCGGATGGGCAA.......................................................................................................................................................... 26 1 2.00 2.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.....GCCTGATCTCCTTCAGTCTGTGCCTAa.......................................................................................................................................................................................................................... 27 a 2.00 0.00 - - - - - - - - - - - - - - - - 2.00 - - - - - - -
.GGATCGCCTGATCTCCTTCAGTCTGTGC............................................................................................................................................................................................................................. 28 1 2.00 2.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
..................................................................................................................................................GGTCCCTGTCGCCAAACATAATGACCAG............................................................................ 28 1 2.00 2.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................CCTCTCCTAGCTCTAAGACTCAC..................................... 23 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - -
.GGATCGCCTGATCTCCTTCAGTCTGTGCC............................................................................................................................................................................................................................ 29 1 2.00 2.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................TTTCTCCTCTCCTAGCTCTAAGACTCAC..................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
........................................GAAGGAAGAAAGTTCATAAACTCATA........................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.............................................................TCATAGGGCACACTGTCCCCCTATCGGA................................................................................................................................................................. 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................CCTGTCGCCAAACATAATGACCAGACA......................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.....CGCCTGATCTCCTTCAGTCTGTGCCT........................................................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................CCACTGTCAACATGTCCT................................................................................................................................ 18 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
..............................................................................................................TCAACATGTCCTGAGCGCTTCTTGGG.................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
............................................................................................................................................................GCCAAACATAATGACCAGACATTATT.................................................................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................TAGGGCACACTGTCCCCCTATCGGA................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - -
....................................................................................................................................................................................TTTTCTTTCTCCTCTCCTAGCTCTA............................................. 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
................................................................................................................AACATGTCCTGAGCGCTTCTTGGGTACTA............................................................................................................. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............TCCTTCAGTCTGTGCCTA.......................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.........................................................................................................CACTGTCAACATGTCCTGAGCGCTTC....................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
....TCGCCTGATCTCCTTCAGTCTGTGCCTA.......................................................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.GGATCGCCTGATCTCCTTCAGTCTGTG.............................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - -
................................AACACTGTGAAGGAAGAAAGTTCATA................................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.....................................................................CACACTGTCCCCCTATCGGATGGGCA........................................................................................................................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................CGCTTCTTGGGTACTAG............................................................................................................ 17 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
........................................................................................................CCACTGTCAACATGTCCTGAGCGCTTC....................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
......GCCTGATCTCCTTCAGTCTGTGCCTAAACA...................................................................................................................................................................................................................... 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............TCCTTCAGTCTGTGCCTAAACACTGT.................................................................................................................................................................................................................. 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................AACATAATGACCAGACATTATTTTCTTT.............................................................. 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................CACTGTGAAGGAAGAAAGTTCATAac................................................................................................................................................................................................ 26 ac 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
............................................GAAGAAAGTTCATAAACTCATAGGGCACA................................................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................CCCTGTCGCCAAACATAATGACCAGcac............................................................................ 28 cac 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
....................................................................................................AGTACCACTGTCAACATGTCCTGAGCG........................................................................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................CATAGGGCACACTGTCCCCCTATCGGA................................................................................................................................................................. 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................ACATGTCCTGAGCGCTTCTTGGGTACTA............................................................................................................. 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................ATGTCCTGAGCGCTTCTTGGGTACTA............................................................................................................. 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.........................................................................................................................................................GTCGCCAAACATAATGACCAGACATTA...................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................ATGTCCTGAGCGCTTCTTGGGTACTAa............................................................................................................. 27 a 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.....TGATCTCCTTCAGTCTGTGCCaccg............................................................................................................................................................................................................................ 25 accg 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................................TCGCCAAACATAATGACCAGACATaa........................................................................ 26 aa 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................................AGGACAGTACCACTGTCAACATGTCCTGA.............................................................................................................................. 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................GTGAAGGAAGAAAGTTCATAAACTCAT......................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...ATCGCCTGATCTCCTTCAGTCTGTGCC............................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00
...........ATCTCCTTCAGTCTGTGCCTAAACACTGT.................................................................................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...ATCGCCTGATCTCCTTCAGTCTGTGC............................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - -
.............................................................................................................................................................................................................AGACTCACGCCCTACTCTCC......................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - -
........................................................................................................................................................................GACCAGACATTATTTTCTTTCTCCTCT....................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................GCCTAAACACTGTGAAGGAAGAAAGTTC................................................................................................................................................................................................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................ATTTTCTTTCTCCTCTCCTAGCTCTA............................................. 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........ATCTCCTTCAGTCTGTGCCTAAACA...................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..............................................................................................................................................GTTCGGTCCCTGTCGCCAAACATAA................................................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................TAGGTTCGGTCCCTGTCGCCAAACATAAa................................................................................... 29 a 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................CTAAGACTCACGCCCTACTCTCCTGC...................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............CTCCTTCAGTCTGTGCCTAAACACTGT.................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -