| Gene: 4930473A06Rik | ID: uc008tlb.1_intron_0_0_chr4_83171675_f.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(9) TESTES |
| GAAGCTGCCTGGGGGTCGTGGGTGTGCAGGCTGGACCACGCGAGTCCGAGGTAACTGCGGGCTGTGGGTGCAATGGTGACTGGCGCCCGGGACCGGGAGGTGCTGAGAGGAGACTGGGCTTGCAGAGAGGACCCGGCTGAGGGCTGCTAGCTGGTGCTGACACGCCTCCAGCTCAGCCTCCAGCCTCCAGCCTCCAGCTCAATGGCCAGGGCTCTCCGCCCACCTTGAGGAAGCCGAGCATCTTCGCTGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................TGAGAGGAGACTGGGCTTGCAGAGA.......................................................................................................................... | 25 | 1 | 11.00 | 11.00 | 10.00 | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................TGAGAGGAGACTGGGCTTGCAGAG........................................................................................................................... | 24 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................TGGGCTTGCAGAGAGGACCCGGC................................................................................................................. | 23 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - |
| .......................................................................................................TGAGAGGAGACTGGGCTTGCAGAaa.......................................................................................................................... | 25 | aa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................TGGTGACTGGCGCCCGGGACCGG.......................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| ..AGCTGCCTGGGGGTCGTGGGTGTa................................................................................................................................................................................................................................ | 24 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................TGGTGACTGGCGCCCGGGACCGGGA........................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................CCGGGACCGGGAGGgga................................................................................................................................................... | 17 | gga | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................AGGAGACTGGGCTTGCAGAGAGGACC..................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| .............................................CCGAGGTAACTGCGGGCTGT......................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................TGACACGCCTCCAGC.............................................................................. | 15 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 |
| GAAGCTGCCTGGGGGTCGTGGGTGTGCAGGCTGGACCACGCGAGTCCGAGGTAACTGCGGGCTGTGGGTGCAATGGTGACTGGCGCCCGGGACCGGGAGGTGCTGAGAGGAGACTGGGCTTGCAGAGAGGACCCGGCTGAGGGCTGCTAGCTGGTGCTGACACGCCTCCAGCTCAGCCTCCAGCCTCCAGCCTCCAGCTCAATGGCCAGGGCTCTCCGCCCACCTTGAGGAAGCCGAGCATCTTCGCTGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................TCCAGCCTCCAGCCTCCAGCTCAA................................................ | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................CGAGGTAACTGCGGGCTGTGGGTGCAA................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| ................................................................................................................................................................................................................................TTGAGGAAGCCGAGCATCTTC..... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................AGCCTCCAGCCTCCAGCCTCCA...................................................... | 22 | 14 | 0.14 | 0.14 | - | 0.14 | - | - | - | - | - | - | - |