| Gene: Mpdz | ID: uc008tjw.1_intron_25_0_chr4_80994649_r | SPECIES: mm9 |
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(5) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| GCCTAAGCACCTCCGAGCTTGCTCCTGCACTGCCTGCTGTGGCTCAGAAGGTACCATCCTGCGGCTAGGACCTGGTGTCTTGACGAGGGAGAGGATGGGAAGGGGAGAGAGAGGATTTCCATCCCAAGGCCCTCCTCGTGTGGGATGAGTGCTTGTCTGACTGAGAGGTGACCTACGAACTTGATTGATTGTGGGTTCTTGCTAAATCACAACTCGGGAGGGAGCATGTGCAATGTTGAAATGACTGCTCCAAAGTCTAGTTTTCTTCCCATGTGACTTTCTCTTTTCTTTCTTCTGGGGTTCTAAGTATTTAACTGACCAGAGCTCTCTGGCATCTGATGCTGAGTCTGTCAACTT .....................................................................................................................................((((..((.((((((....)))))).))...)))).(((((((((..........)))))))))................................................................................................................................................................ ....................................................................................................................................133......................................................................206..................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| .........................................................................................................................................GTGTGGGATGAGTGCTTGTCTGACT................................................................................................................................................................................................... | 25 | 1 | 18.00 | 18.00 | 6.00 | 5.00 | 2.00 | - | - | - | 2.00 | - | 1.00 | 1.00 | - | - | - | - | 1.00 |
| .....................................................................................................................................................................AGGTGACCTACGAACTTGAT............................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................GAGGTGACCTACGAACTTG.............................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................CGTGTGGGATGAGTGCTTGTCTGACTG.................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................................................CGTGTGGGATGAGTGCTTGTCTGACT................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................................................TTGATTGTGGGTTCctgc........................................................................................................................................................... | 18 | ctgc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CTTGATTGATTGTGagtt................................................................................................................................................................ | 18 | agtt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................GTGTGGGATGAGTGCTTGTCTGACTG.................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGTGGGATGAGTGCTTGTCTGt..................................................................................................................................................................................................... | 22 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................GTGTGGGATGAGTGCTTGTCTGACTGAGA............................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................................................................................................................................................................CTGACCAGAGCTCTCTGGCAT...................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................AGAAGGTACCATCCTGCG...................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| GCCTAAGCACCTCCGAGCTTGCTCCTGCACTGCCTGCTGTGGCTCAGAAGGTACCATCCTGCGGCTAGGACCTGGTGTCTTGACGAGGGAGAGGATGGGAAGGGGAGAGAGAGGATTTCCATCCCAAGGCCCTCCTCGTGTGGGATGAGTGCTTGTCTGACTGAGAGGTGACCTACGAACTTGATTGATTGTGGGTTCTTGCTAAATCACAACTCGGGAGGGAGCATGTGCAATGTTGAAATGACTGCTCCAAAGTCTAGTTTTCTTCCCATGTGACTTTCTCTTTTCTTTCTTCTGGGGTTCTAAGTATTTAACTGACCAGAGCTCTCTGGCATCTGATGCTGAGTCTGTCAACTT .....................................................................................................................................((((..((.((((((....)))))).))...)))).(((((((((..........)))))))))................................................................................................................................................................ ....................................................................................................................................133......................................................................206..................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ......................................................................................................................................................................................................................................................TCCAAAGTCTAGTTTTag............................................................................................. | 18 | ag | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................AGCATGTGCAATGTTGggt....................................................................................................................... | 19 | ggt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |