| Gene: Klf4 | ID: uc008sxk.1_intron_3_0_chr4_55544623_r | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(14) TESTES |
| TCTCTCTTCTTCGGACTCCGGAGGACCTTCTGGGCCCCCACATTAATGAGGTAGGTGAGATGTTGGACTTGGGAACAGAAAGGGGTGAGGATTGGAGGGAAGCTTCGGAGCAGTGGCCAGGGTGTCCCCTGACTCCTGGTCCCTGTGCGCCCCGCCCGGCCCGCAGGCAGCCACCTGGCGAGTCTGACATGGCTGTCAGCGACGCTCTGCTCCCGT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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| ..................................................GTAGGTGAGATGTTGGACTTGGGAAC............................................................................................................................................ | 26 | 1 | 10.00 | 10.00 | 1.00 | 1.00 | 2.00 | - | 3.00 | - | - | - | - | - | - | 1.00 | 1.00 | 1.00 |
| ..................................................GTAGGTGAGATGTTGGACTTGGGAACA........................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TTGGAGGGAAGCTTCGGAGCAGTGGC................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................TCTGGGCCCCCACATTAATGAGGcagc................................................................................................................................................................. | 27 | cagc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................AGGTGAGATGTTGGACTTGGGAACAG.......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................GGATTGGAGGGAAGCTTCGGAGCAG....................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................................TGGCTGTCAGCGACGCTCTGC...... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TTGGGAACAGAAAGGGGTG................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................TGAGGTAGGTGAGATGTTGGACTTGa................................................................................................................................................ | 26 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TGAGATGTTGGACTTGGGAACAGAAA....................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............CTCCGGAGGACCgag.......................................................................................................................................................................................... | 15 | gag | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............GGACTCCGGAGGACCTTCTGGGCCCCCACATT............................................................................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TGTTGGACTTGGGAACAGAAAGGGG................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CACCTGGCGAGTCTGACATGGCTG..................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........CTTCGGACTCCGGAGGACCTTCTGGGC..................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................GTAGGTGAGATGTTGGACTTGGGAACAG.......................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TGGACTTGGGAACAGAAAGGGGTG................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| TCTCTCTTCTTCGGACTCCGGAGGACCTTCTGGGCCCCCACATTAATGAGGTAGGTGAGATGTTGGACTTGGGAACAGAAAGGGGTGAGGATTGGAGGGAAGCTTCGGAGCAGTGGCCAGGGTGTCCCCTGACTCCTGGTCCCTGTGCGCCCCGCCCGGCCCGCAGGCAGCCACCTGGCGAGTCTGACATGGCTGTCAGCGACGCTCTGCTCCCGT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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