| Gene: Mcart1 | ID: uc008ssr.1_intron_1_0_chr4_45417708_r.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| GCGCGGGCTCGCTCGCCAGCCGTCCTGCGGGCTTGCGCCCCGGGCCGTGGGTGAGTCCTGGGTGGGGTGCGGTGGGGAGCGGAGGCCGCTGTGCTGCCCTAGCTTCGGGCCAGAGAGAAGGGAGGCTTGAAGCAGGGTCGCGGGCTGCCGAGCTCCAGGTCCTGCGCTCTCCACGCGTCCGGGTCCCGGCAGCTGCGGCCCGGCTCCGGCCGAGGGCCCTGTGGTGCTGCGGCGCGCTCCGGCAGGGAGG ....................................................((((...((((..((..((((((..........))))))..))))))..))))((((((............))))))......................................................................................................................... ....................................................53..........................................................................129....................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGgggt.................................. | 18 | gggt | 77.00 | 0.00 | 37.00 | 25.00 | 6.00 | 6.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGggga.................................. | 18 | ggga | 28.00 | 0.00 | 13.00 | 12.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGggcg.................................. | 18 | ggcg | 12.00 | 0.00 | 4.00 | 1.00 | 6.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGtgg................................... | 17 | tgg | 7.00 | 0.00 | 1.00 | - | 5.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGCGGGCTTGCGCCCCGGGCCGTGGGa...................................................................................................................................................................................................... | 27 | a | 5.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGcgg................................... | 17 | cgg | 5.00 | 0.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TAGCTTCGGGCCAGAGAGAAGGGAGG............................................................................................................................. | 26 | 1 | 5.00 | 5.00 | - | - | - | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGgggc.................................. | 18 | gggc | 5.00 | 0.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGcggg.................................. | 18 | cggg | 4.00 | 0.00 | 1.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGgga................................... | 17 | gga | 3.00 | 0.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGCGGGCTTGCGCCCCGGGCCGTGGGat..................................................................................................................................................................................................... | 28 | at | 3.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................TAGCTTCGGGCCAGAGAGAAGGGAG.............................................................................................................................. | 25 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGgcg................................... | 17 | gcg | 3.00 | 0.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TCGCGGGCTGCCGAGCTCCAG............................................................................................ | 21 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCtggg................................... | 17 | tggg | 3.00 | 0.00 | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGCGGGCTTGCGCCCCGGGCCGTGGGaa..................................................................................................................................................................................................... | 28 | aa | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................TCGCGGGCTGCCGAGCTCCAGGaa......................................................................................... | 24 | aa | 2.00 | 0.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CGGGCTTGCGCacca................................................................................................................................................................................................................ | 15 | acca | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TAGCTTCGGGCCAGAGAGAAGGGAGGC............................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................CTGGGTGGGGTGCGGTGGG.............................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCtggc................................... | 17 | tggc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TCGCGGGCTGCCGAGCTCCAGGT.......................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TCGCGGGCTGCCGAGCTCCAGGTa......................................................................................... | 24 | a | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGgtg................................... | 17 | gtg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGggag.................................. | 18 | ggag | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCaggg................................... | 17 | aggg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TCGCGGGCTGCCGAGCTCCAGGTat........................................................................................ | 25 | at | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................GGGGAGCGGAGGCCGCTG............................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................GGGAGCGGAGGCCGCTGTG............................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TAGCTTCGGGCCAGAGAGAAGGGAGGCT........................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................AGCTTCGGGCCAGAGAGAAGGGAGGCT........................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGggtg.................................. | 18 | ggtg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGgtgt.................................. | 18 | gtgt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TAGCTTCGGGCCAGAGAGAAGGGAGGa............................................................................................................................ | 27 | a | 1.00 | 5.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................GGGAGCGGAGGCCGCTGTGC............................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................AGAGAAGGGAGGCTTGAAGCAGGGTa............................................................................................................... | 26 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TCTCCACGCGTCCGGGTCC................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................TGCGGGCTTGCGCCCCGGGCCGTGGGT...................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCCGGCTCCGGCCGtggg.................................. | 18 | tggg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................CTGGGTGGGGTGCGGTGGGG............................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GAGTCCTGGGTGGGGTGCGGTGGGGAG........................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................................................GCCCGGCTCCGGCCGgggg.................................. | 19 | gggg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TCGCGGGCTGCCGAGCTCCAGGTC......................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TCGCGGGCTGCCGAGCTCCAGGa.......................................................................................... | 23 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................CGGGCCGTGGGTGAGTCCTGG............................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TTGAAGCAGGGTCGCGGGCTGt...................................................................................................... | 22 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TGGGTGGGGTGCGGTGGGG............................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................GTGGGGTGCGGTGGGGAG........................................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................GGGTGGGGTGCGGTGGGGA............................................................................................................................................................................ | 19 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - |
| GCGCGGGCTCGCTCGCCAGCCGTCCTGCGGGCTTGCGCCCCGGGCCGTGGGTGAGTCCTGGGTGGGGTGCGGTGGGGAGCGGAGGCCGCTGTGCTGCCCTAGCTTCGGGCCAGAGAGAAGGGAGGCTTGAAGCAGGGTCGCGGGCTGCCGAGCTCCAGGTCCTGCGCTCTCCACGCGTCCGGGTCCCGGCAGCTGCGGCCCGGCTCCGGCCGAGGGCCCTGTGGTGCTGCGGCGCGCTCCGGCAGGGAGG ....................................................((((...((((..((..((((((..........))))))..))))))..))))((((((............))))))......................................................................................................................... ....................................................53..........................................................................129....................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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| ..............................GCGCCCCGGGCCGTgatc.......................................................................................................................................................................................................... | 18 | gatc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |