| Gene: Polr1e | ID: uc008sse.1_intron_9_0_chr4_45043707_f.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(15) TESTES |
| AACACCAAGCTGCTGAAACAGTTCACCTGCTTGACCTACAACAACGGCAGGTCAGGGGCTGCCTGTATGAAGAAGAAAGCAGTCGGGAGGTGGCCATGAAGGGTGGGGGCTCACGTGCAGTTTCACGTCCAAAGAGATACAGTGCCAAAGAGCTCACTGCCACCGGTTGGCTTCCGGGGACACATATATGTTACATGCACTGTGCCCCTCAGAAGTGTTCATTTTGTCTTTGGCTGTGACCCCTGCAGTG ...............................................................((((((.............(((((((.(((((......(((((((((((....((((((((.........)))))....)))....)))))).)))))...))))).))))))).((((......)))).))))))................................................... ............................................................61.........................................................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................TATGAAGAAGAAAGCAGTCGGGAGGTG.............................................................................................................................................................. | 27 | 1 | 6.00 | 6.00 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TGTATGAAGAAGAAAGCAGTCGGGAG................................................................................................................................................................. | 26 | 1 | 4.00 | 4.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TGAAGAAGAAAGCAGTCGGGAGGTGG............................................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................TGAAGAAGAAAGCAGTCGGGAGGTG.............................................................................................................................................................. | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TGGCTTCCGGGGACACATATATGTTA......................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................GTCAGGGGCTGCCTGTATGAAGAAGA.............................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................TGCCTGTATGAAGAAGAAAGCAGTCGG.................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TATGAAGAAGAAAGCAGTCGGGAGGT............................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................CACCTGCTTGACCTACAACAACGGCA......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................TGTATGAAGAAGAAAGCAGTCGGGAGG................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................GTATGAAGAAGAAAGCAGTCGGGAGGTG.............................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................GGGGCTGCCTGTATGAAGAAGAAAGCAG........................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................................................................................TTTTGTCTTTGGCTGTttct......... | 20 | ttct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................TGCCTGTATGAAGAAGAAAGCAGTCGGG................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................CACCTGCTTGACCTACAACAACGGC.......................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TGAAGAAGAAAGCAGTCGGGAGGTGt............................................................................................................................................................. | 26 | t | 1.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TATGAAGAAGAAAGCAGTCGGGAGGTa.............................................................................................................................................................. | 27 | a | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGGGGGCTCACGTGCAGTTTCACGTCC........................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................AGATACAGTGCCAAAGAGCTCACTGCCACC...................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................TGTATGAAGAAGAAAGCAGTCGGGAGGT............................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TATGAAGAAGAAAGCAGTCGGGAG................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| AACACCAAGCTGCTGAAACAGTTCACCTGCTTGACCTACAACAACGGCAGGTCAGGGGCTGCCTGTATGAAGAAGAAAGCAGTCGGGAGGTGGCCATGAAGGGTGGGGGCTCACGTGCAGTTTCACGTCCAAAGAGATACAGTGCCAAAGAGCTCACTGCCACCGGTTGGCTTCCGGGGACACATATATGTTACATGCACTGTGCCCCTCAGAAGTGTTCATTTTGTCTTTGGCTGTGACCCCTGCAGTG ...............................................................((((((.............(((((((.(((((......(((((((((((....((((((((.........)))))....)))....)))))).)))))...))))).))))))).((((......)))).))))))................................................... ............................................................61.........................................................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................GCTCACGTGCAGTTTCACGTCCAAAGAGA................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGCAGTTTCACGTCCAAAGAGATACA............................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGCCCCTCAGAAGTGTTCATTTTGTC...................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................................................................................................................GCCCCTCAGAAGTGTTCATTTTGTCTTTGG................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |