| Gene: Stoml2 | ID: uc008soy.1_intron_0_0_chr4_43041166_r.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| CAGTGCTACTGCCCTCCAATCCCAGCGACGTCACGAGTATGGTGGCTCAGGTTAGAGCTCTTTGAAGATAAGCATACAATAACAGTGTCAGGAGCTAAGAATGAAGGTTTCCACTAACTCCTGCAGATTCCTGTGTCAGTGTTGGGAGCCGCCCTGCTTTGATGGTTTGATGTAAGAGACTTAGAATTGTTTGCAAGGCTCAGAAAACTGAGGCTTGAAGGATAAGAAAAACCAAGGGGCTGGGTGTGAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................ACAGTGTCAGGAGCTAAGAATGAAGGT.............................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TGCTTTGATGGTTTGATGTAAGAGA....................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................AGCATACAATAACAGTGTCAGGAGCTA......................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................TCCCAGCGACGTCACGAGTATGGTGGC............................................................................................................................................................................................................ | 27 | 2 | 2.00 | 2.00 | - | - | - | 0.50 | - | - | - | 0.50 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................TACAATAACAGTGTCAGGAGCTAAGAA..................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............CCAATCCCAGCGACGTCACGAGTATG................................................................................................................................................................................................................. | 26 | 2 | 1.50 | 1.50 | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TTCCACTAACTCCTGCAGATTCCTGTG................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGAAGGTTTCCACTAACTCCTGCAGATT......................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................GCATACAATAACAGTGTCAGGAGCTAA........................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................ATCCCAGCGACGTCACGAGTATGGT............................................................................................................................................................................................................... | 25 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................TAACAGTGTCAGGAGCTAAGAATGAAGGT.............................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................AGTATGGTGGCTCAGGTTAGAGCTCTTT........................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................ACAGTGTCAGGAGCTAAGAATGAAGGTT............................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TCCCAGCGACGTCACGAGTATGGTG.............................................................................................................................................................................................................. | 25 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................GTCAGGAGCTAAGAATGAAGG............................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................GCTCAGGTTAGAGCTCTTTGAAGATAAGCAT............................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................GATGTAAGAGACTTAGAATTGTTTGC........................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................................ACAGTGTCAGGAGCTAAGAATGAAGG............................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TGGGAGCCGCCCTGCTTTGATGGTTT.................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................GATAAGCATACAATAACAGTGTCAGGAG............................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................GTAAGAGACTTAGAATTGTTTGCAAGGCT.................................................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................AGCATACAATAACAGTGTCAGGAGC........................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TAAGCATACAATAACAGTGTCAGGAGCTA......................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TAACAGTGTCAGGAGCTAAGAATGAAGG............................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...TGCTACTGCCCTCCAATCCCAGCGACGTC.......................................................................................................................................................................................................................... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ......................CAGCGACGTCACGAGTATGGTGGCTCA......................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| .....................CCAGCGACGTCACGAGTATGGTGGCTC.......................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ................................ACGAGTATGGTGGCTCAG........................................................................................................................................................................................................ | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| .......................AGCGACGTCACGAGTATGGTGGCTCA......................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| CAGTGCTACTGCCCTCCAATCCCAGCGACGTCACGAGTATGGTGGCTCAGGTTAGAGCTCTTTGAAGATAAGCATACAATAACAGTGTCAGGAGCTAAGAATGAAGGTTTCCACTAACTCCTGCAGATTCCTGTGTCAGTGTTGGGAGCCGCCCTGCTTTGATGGTTTGATGTAAGAGACTTAGAATTGTTTGCAAGGCTCAGAAAACTGAGGCTTGAAGGATAAGAAAAACCAAGGGGCTGGGTGTGAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................CGTCACGAGTAatga................................................................................................................................................................................................................... | 15 | atga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |