| Gene: AK080292 | ID: uc008rzc.1_intron_0_0_chr4_11105822_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(5) PIWI.ip |
(21) TESTES |
| GCCTGAAACGGTAGCCTGGCTCACCAATGGAAGCAGTTTCATGGTAGAGGGTAAGTGCAGAGCTGGGGCAGCAGTAGTGGACGGGAAATCTGTTATATGGGCCAGCAGCCTGCCTGAAGGGACATCAGCCCAAAAAGCAGAACTTACTGCCTTAATTCAAGCTTTAAGGCTAGCAAAGGGAAAGGTTATCAATATTTATACCGGCAGCTGGTATGCTTTTGCAACAGCTCATGTTCACGGGGCAATCTAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................TAGTGGACGGGAAATCTGTTATATGGGC.................................................................................................................................................... | 28 | 1 | 9.00 | 9.00 | - | 2.00 | - | - | - | 3.00 | - | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - | 1.00 | - | - | - | - |
| ...........................TGGAAGCAGTTTCATGGTAGAGGccc..................................................................................................................................................................................................... | 26 | ccc | 3.00 | 0.50 | - | - | - | - | 1.50 | - | - | - | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ...........................TGGAAGCAGTTTCATGGTAGAGGGTA..................................................................................................................................................................................................... | 26 | 2 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ...........................................................................AGTGGACGGGAAATCTGTTATATGGGC.................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................ATCTGTTATATGGGCCAGCAGCCTGCCT....................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................TAGTGGACGGGAAATCTGTTATATGGGt.................................................................................................................................................... | 28 | t | 2.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................GACGGGAAATCTGTTATATGGGCCAGC................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................GGACGGGAAATCTGTTATATGGGCCAGC................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TGCAACAGCTCATGTTCACGGGGCAATCT.. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................TGGACGGGAAATCTGTTATATGGGCCAGC................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TAGTGGACGGGAAATCTGTTATATGG...................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TAAGGCTAGCAAAGGGAAAGGTTATC............................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................................................................CCGGCAGCTGGTATGCTTTTGCAACAGC...................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TAGTGGACGGGAAATCTGTTATATGGG..................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................TAGTGGACGGGAAATCTGTTATATG....................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................TGGTAGAGGGTAAGTGCAGAGCTGa........................................................................................................................................................................................ | 25 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................ACCAATGGAAGCAGTTTCATGGTAGAGGc....................................................................................................................................................................................................... | 29 | c | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TAGTGGACGGGAAATCTGTTATATtggc.................................................................................................................................................... | 28 | tggc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TATGCTTTTGCAACAGCTCATGTTCACGG.......... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...TGAAACGGTAGCCTGGCTCACCAATG............................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TTTCATGGTAGAGGGTAAGTGCAGAGCTa......................................................................................................................................................................................... | 29 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................ACGGGAAATCTGTTATATGGGCCAGC................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................TGGAAGCAGTTTCATGGTAGAGGc....................................................................................................................................................................................................... | 24 | c | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ...........................TGGAAGCAGTTTCATGGTAGAGGatc..................................................................................................................................................................................................... | 26 | atc | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TGTTATATGGGCCAGCAGCCTGCCTGAA.................................................................................................................................... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ...........................TGGAAGCAGTTTCATGGTAGAGG........................................................................................................................................................................................................ | 23 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TGAAGGGACATCAGCCCAAAAAGCAG.............................................................................................................. | 26 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................CCAATGGAAGCAGTTTCATGGTAGAGG........................................................................................................................................................................................................ | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCCTGAAACGGTAGCCTGGCTCACCAATGGAAGCAGTTTCATGGTAGAGGGTAAGTGCAGAGCTGGGGCAGCAGTAGTGGACGGGAAATCTGTTATATGGGCCAGCAGCCTGCCTGAAGGGACATCAGCCCAAAAAGCAGAACTTACTGCCTTAATTCAAGCTTTAAGGCTAGCAAAGGGAAAGGTTATCAATATTTATACCGGCAGCTGGTATGCTTTTGCAACAGCTCATGTTCACGGGGCAATCTAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................AGCCTGCCTGAAGGGACATCAGCCCAAAa.................................................................................................................... | 29 | a | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................ACCAATGGAAGCAGTTTCATGGTAGA.......................................................................................................................................................................................................... | 26 | 2 | 1.50 | 1.50 | - | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................AGTTTCATGGTAGAGGGc....................................................................................................................................................................................................... | 18 | c | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................GCTAGCAAAGGGAAttac.................................................................... | 18 | ttac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................................................................GTATGCTTTTGCAACAGCTCATGTTCACG........... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |