| Gene: Lrrc44 | ID: uc008ruv.1_intron_0_0_chr3_154756635_f.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) PIWI.ip |
(10) TESTES |
| GAGAAGACCAACCCACCCACCATTAGTGGATCCACCACCCAGATGCTGAGGTGACCTGCCCGCACGGAGCTCCTATTCCTGTCAGAAGCCTCCCAGGGAGGCCAGGCCCCTGAACCAGAGAGAGGCTCGGCTCTGTGGGATGCTTTCTGGTGGGCCAGACTACTCTGCACCCTTCAGTTGTCCAACTTCCCAGGCCCAGTACTGAACTAGCGCCTTTAGCCAGCACTGCACACTCTGTTGTGTTCACTTG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................AGGCTCGGCTCTGTGGGATGC........................................................................................................... | 21 | 1 | 9.00 | 9.00 | 7.00 | 1.00 | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................AGGCTCGGCTCTGTGGGATGCT.......................................................................................................... | 22 | 1 | 3.00 | 3.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................AGGCTCGGCTCTGTGGGAT............................................................................................................. | 19 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................AGGCTCGGCTCTGTGGGATGCTat........................................................................................................ | 24 | at | 2.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................AGGCTCGGCTCTGTGGGATG............................................................................................................ | 20 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - |
| ..........................................................................................................................AGGCTCGGCTCTGTGGGAagc........................................................................................................... | 21 | agc | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................GCTCGGCTCTGTGGGATGCTTT........................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................AGGCTCGGCTCTGTGGGATGCa.......................................................................................................... | 22 | a | 1.00 | 9.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................AGGCTCGGCTCTGTGGGATGCTaac....................................................................................................... | 25 | aac | 1.00 | 3.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................GTGACCTGCCCGCACGGAGCTC.................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................TCGGCTCTGTGGGATGCTTTCTGt.................................................................................................... | 24 | t | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................TAGTGGATCCACCACCCAGATGCTGAGa....................................................................................................................................................................................................... | 28 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................AGGCTCGGCTCTGTGGGA.............................................................................................................. | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................CCATTAGTGGATCCACCACCCAGATG............................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| GAGAAGACCAACCCACCCACCATTAGTGGATCCACCACCCAGATGCTGAGGTGACCTGCCCGCACGGAGCTCCTATTCCTGTCAGAAGCCTCCCAGGGAGGCCAGGCCCCTGAACCAGAGAGAGGCTCGGCTCTGTGGGATGCTTTCTGGTGGGCCAGACTACTCTGCACCCTTCAGTTGTCCAACTTCCCAGGCCCAGTACTGAACTAGCGCCTTTAGCCAGCACTGCACACTCTGTTGTGTTCACTTG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................GCACCCTTCAGTTGTCCAACTTCCCA.......................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 |