| Gene: Rabggtb | ID: uc008ruf.1_intron_3_0_chr3_153572424_r | SPECIES: mm9 |
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(4) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(23) TESTES |
| AAATTGATACAAGATTCTCATTTTGTGCGGTGGCAACTTTGGCTCTTTTGGTAAGCTTTGACTGTTGCATTAAAGGACCGAATTAAACACTTGAGTACTAGGTAGCTGTAATAGGCTGCTTCCTTTCTCGTCATAGGGCAAGCTTGATGCTATTAATGTGGAAAAGGCGATTGAGTTTGTTTTGTC .............................................................((((.((...((((((.........((......))....(((((((......)))))))))))))...)).)))).................................................. ..................................................51...................................................................................136................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| ..................................................GTAAGCTTTGACTGTTGCATTAAAGGACC........................................................................................................... | 29 | 1 | 14.00 | 14.00 | - | 1.00 | 6.00 | 1.00 | 4.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TATTAATGTGGAAAAGGCGATTGAGTT......... | 27 | 1 | 8.00 | 8.00 | 3.00 | 1.00 | - | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGCTTTGACTGTTGCATTAAAGG.............................................................................................................. | 26 | 1 | 6.00 | 6.00 | - | - | 1.00 | - | - | - | - | - | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TATTAATGTGGAAAAGGCGATTGAGT.......... | 26 | 1 | 6.00 | 6.00 | 1.00 | - | - | - | - | 1.00 | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 |
| ..................................................GTAAGCTTTGACTGTTGCATTAAAGGAC............................................................................................................ | 28 | 1 | 5.00 | 5.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - |
| ................................................................................................................................................TGATGCTATTAATGTGGAAAAGGCGA................ | 26 | 1 | 4.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................GTAAGCTTTGACTGTTGCATTAAAGGA............................................................................................................. | 27 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................TTGTGCGGTGGCAACTTTGGCTCTTTTG........................................................................................................................................ | 28 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGATGCTATTAATGTGGAAAAGGCGAT............... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................TCATTTTGTGCGGTGGCAACTTTGGC............................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TTAATGTGGAAAAGGCGATTGAGTTT........ | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGATGCTATTAATGTGGAAAAGGCGATT.............. | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......TACAAGATTCTCATTTTGTGCGGTGGC........................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TAATGTGGAAAAGGCGATTGAGTTcgt...... | 27 | cgt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TTGAGTACTAGGTAGCTGTAATA......................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGCTATTAATGTGGAAAAGGCGATT.............. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGCTATTAATGTGGAAAAGGCGAT............... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TTCTCATTTTGTGCGGTGGCAACTTTGt................................................................................................................................................ | 28 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................GCAAGCTTGATGCTATTAATGTGGAAAAGG................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................CTCATTTTGTGCGGTGGCAACTTTGG................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................AGGACCGAATTAAACACTTGAGTACTAGGT................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGCTTTGACTGTTGCATTAAAGta............................................................................................................. | 27 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGCGGTGGCAACTTTGGCTCTTTTGGgcaa................................................................................................................................... | 30 | gcaa | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TCTCATTTTGTGCGGTGGCAACTTTGGC............................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TAATGTGGAAAAGGCGATTGAGTTTGT...... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................CTCATTTTGTGCGGTGGCAACTTTG................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................TTAATGTGGAAAAGGCGATTGAGTTTGT...... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................AATGTGGAAAAGGCGATTGAGTTT........ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......ATACAAGATTCTCATTTTGTGCGGTGGC........................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................TTTGTGCGGTGGCAACTTTGGC............................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................TTCCTTTCTCGTCATAG.................................................. | 17 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TTTTGTGCGGTGGCAACTTT.................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGATGCTATTAATGTGGAAAAGGCGATTt............. | 29 | t | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGCGGTGGCAACTTTGGCTCTTTTGGgca.................................................................................................................................... | 29 | gca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| AAATTGATACAAGATTCTCATTTTGTGCGGTGGCAACTTTGGCTCTTTTGGTAAGCTTTGACTGTTGCATTAAAGGACCGAATTAAACACTTGAGTACTAGGTAGCTGTAATAGGCTGCTTCCTTTCTCGTCATAGGGCAAGCTTGATGCTATTAATGTGGAAAAGGCGATTGAGTTTGTTTTGTC .............................................................((((.((...((((((.........((......))....(((((((......)))))))))))))...)).)))).................................................. ..................................................51...................................................................................136................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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