| Gene: Ctbs | ID: uc008rrg.1_intron_0_0_chr3_146113595_f.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(21) TESTES |
| GCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGTCAGCACTCATTTGCCCGTCGGTCTGATACTCAAGGCTGTAGAAGTTGTGCGCTCACTGAGTAGCCTTAACCACCAGAGTCTTCCTCTTTTTAGATTTCCTTCAGAGGTTGGGCAACTTCCCAGGCCGCAGACTGTGTAATGCTCCTGCCTCATCAGATTCCCGAGGCCAGCTCCTCCCGCTAACCGCTCAGCCACCTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................TACTCAAGGCTGTAGAAGTTGTGCGC.................................................................................................................................................. | 26 | 1 | 15.00 | 15.00 | - | 1.00 | - | - | - | - | 2.00 | - | 4.00 | 3.00 | 4.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................TGATACTCAAGGCTGTAGAAGTTGTGC.................................................................................................................................................... | 27 | 1 | 6.00 | 6.00 | 3.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................TGATACTCAAGGCTGTAGAAGTTGTG..................................................................................................................................................... | 26 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................TACTCAAGGCTGTAGAAGTTGTGCGCT................................................................................................................................................. | 27 | 1 | 4.00 | 4.00 | - | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................TACTCAAGGCTGTAGA............................................................................................................................................................ | 16 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TACTCAAGGCTGTAGAAGTTGTGCG................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................CAGGCCGCAGACTGTGTAA........................................................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TGCCCGTCGGTCTGATACTCAAGG................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TCATTTGCCCGTCGGTCTGATACTCA...................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TGATACTCAAGGCTGTAGAAGTTGT...................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TGATACTCAAGGCTGTAGAAGTTtttc.................................................................................................................................................... | 27 | tttc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TGTGTAATGCTCCTGCCTCATCAGATT....................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................CTCAAGGCTGTAGAAGTTGTGCGCTCA............................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................TCGGTCTGATACTCAAGGCTGTAGAAGT......................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TGAGTAGCCTTAACCACCAGAGTCTTCC.................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................ATTTCCTTCAGAGGgaga....................................................................................... | 18 | gaga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................................................................TCCCAGGCCGCAGACTGTGTAATGC........................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TTTTTAGATTTCCTTCAGAGGTTGGGC..................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................TACTCAAGGCTGTAGAAGTTGTGCGCTC................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................TCTGATACTCAAGGCTGTAGAAGTTGTGC.................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TCATTTGCCCGTCGGTCTGATACTCAAGG................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TGAGTAGCCTTAACCACCAGAGTCTTCCT................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................TGATACTCAAGGCTGTAGA............................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TCGGTCTGATACTCAAGGC.................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................TACTCAAGGCTGTAGAAGTTGTGCGa.................................................................................................................................................. | 26 | a | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................CTCAAGGCTGTAGAAGTTGTG..................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TCTGATACTCAAGGCTGT............................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TAACCACCAGAGTCTTCCTCTTTTTAGAT....................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| GCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGTCAGCACTCATTTGCCCGTCGGTCTGATACTCAAGGCTGTAGAAGTTGTGCGCTCACTGAGTAGCCTTAACCACCAGAGTCTTCCTCTTTTTAGATTTCCTTCAGAGGTTGGGCAACTTCCCAGGCCGCAGACTGTGTAATGCTCCTGCCTCATCAGATTCCCGAGGCCAGCTCCTCCCGCTAACCGCTCAGCCACCTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................TAGCCTTAACCACtgga............................................................................................................................. | 17 | tgga | 391.00 | 0.00 | 130.00 | 153.00 | 44.00 | 26.00 | 21.00 | 14.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | 1.00 | - | - |
| ............................................................................................................TAGCCTTAACCAtgga.............................................................................................................................. | 16 | tgga | 80.00 | 0.00 | 39.00 | 18.00 | 7.00 | 10.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TAGCCTTAACCACttga............................................................................................................................. | 17 | ttga | 4.00 | 0.00 | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TAGCCTTAACCACtggt............................................................................................................................. | 17 | tggt | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................ATGCTCCTGCCTCATCAGATTC...................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TAGCCTTAACCACagga............................................................................................................................. | 17 | agga | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TAGCCTTAACCACtcga............................................................................................................................. | 17 | tcga | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................CGCTCAGCCACCTGcata | 18 | cata | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................GTAGCCTTAACCACgga............................................................................................................................. | 17 | gga | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TCGGTCTGATACTCatta....................................................................................................................................................................... | 18 | atta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |