| Gene: Ssx2ip | ID: uc008rrb.1_intron_4_0_chr3_146082312_f.5p | SPECIES: mm9 |
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(1) OTHER.ip |
(1) OTHER.mut |
(4) PIWI.ip |
(17) TESTES |
| AGCTGGGCAGTGACATGGACCACCTGCAGAGCTGCTACGCCAAACTTAAGGTACAGTCGTCCATCCCCCTGTCTCAGTGCTGTGCCACAGGACACGGTTCCACATGAGGCCACGGTTCCACATGAGGCCACGGGCTTCAGATGTGATTCAGGGTTGTGTTTAAAACCTGAAGTTTCTTTAAATGTAGGAAGAGTGGTTTCCAGAAATGAGCACGCATTGGTTGCTGCTGCTCGCTGTCTGGGCTGAAGGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................TTCCACATGAGGCCACGGGCTTCAGATGTGATTCAGGGTTGTGTTTAAAACC................................................................................... | 52 | 1 | 173.00 | 173.00 | 173.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TGGACCACCTGCAGAGCTGCTACGCCAAACTTAAG........................................................................................................................................................................................................ | 35 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............ATGGACCACCTGCAGAGCTGCTACGCC................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............ATGGACCACCTGCAGAGCTGCTACGC.................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................ACCTGCAGAGCTGCTACGCCAAACTT........................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............TGGACCACCTGCAGAGCTGCTA..................................................................................................................................................................................................................... | 22 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................CTACGCCAAACTTAAGGagc.................................................................................................................................................................................................... | 20 | agc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............TGGACCACCTGCAGAGCTGCTACGCCAA............................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................ACCACCTGCAGAGCTGCTACGCCAA............................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................................................................................................................................................TTGCTGCTGCTCGCTGTCTGGGCTGAA... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........TGACATGGACCACCTGCAGAGCTGCTA..................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............TGGACCACCTGCAGAGCTGCTACGCCAt............................................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........AGTGACATGGACCACCTGCAGAGCTGC....................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........GTGACATGGACCACCTGCAGAGCTGCTAC.................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................CCACCTGCAGAGCTGCTACGCCAAACTT........................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| AGCTGGGCAGTGACATGGACCACCTGCAGAGCTGCTACGCCAAACTTAAGGTACAGTCGTCCATCCCCCTGTCTCAGTGCTGTGCCACAGGACACGGTTCCACATGAGGCCACGGTTCCACATGAGGCCACGGGCTTCAGATGTGATTCAGGGTTGTGTTTAAAACCTGAAGTTTCTTTAAATGTAGGAAGAGTGGTTTCCAGAAATGAGCACGCATTGGTTGCTGCTGCTCGCTGTCTGGGCTGAAGGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................ACCTGAAGTTTCTTTAagt...................................................................... | 19 | agt | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - |
| ................................................................................................................................................................ACCTGAAGTTTCTTTAagtt...................................................................... | 20 | agtt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................ACCTGAAGTTTCTTTAagta...................................................................... | 20 | agta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................ACCTGAAGTTTCTTTAat...................................................................... | 18 | at | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |