| Gene: Cyr61 | ID: uc008rqq.1_intron_2_0_chr3_145311842_r | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.ip |
(13) TESTES |
| GGAATGCAATTTCGGCGCCAGCTCCACCGCTCTGAAAGGGATCTGCAGAGGTAAGAGGCTTGTGGTTTGGCCCCTTTAAAAAAAATAATAGTCCCCATAGTCCAGAAGTTTAGTAATTTTGAGACCATGTATGGTGGACGCTTTGTTGATGGTAGCTTGGCAGAAAGGCACATGATTTCAGCAGTCTGGAATGCAATTCAGAGTGTCTGGGCCCAACGAAAAGCGCATACGGAAAAGTGATTCCTGACTAACTTATTGTTCAGCTCTGGAGTCTCGGGGGAACTGTAGGGAACTTTACCATACATTGAATTGAACAGCGGAAAATATGTATGAGTTTCAGCCTGTGGCGGCGAATCTTAACCTTCTCCTCTCTCTCTTTTGGTCGTCTTTGCAGCTCAGTCAGAAGGCAGACCCTGTGAATATAACTCCAGAATCTACCAAAAC ..........................................................................................................................................................................................................................................................................................(((((((((.....((((..((......))...((.(((.((...((.((((.(((.(((......)))))).)))))).)).))).))........))))..))))))))).................................................. ..........................................................................................................................................................................................................................................................................................283............................................................................................................394................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................AGGTAAGAGGCTTGTGGTT......................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................GGGAACTTTACCATACATTGAATTGAACAGCG............................................................................................................................. | 32 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................CCTCTCTCTCTTTTGGTCGTCTTTGCAG.................................................. | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................CGGGGGAACTGTAGG........................................................................................................................................................... | 15 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................GGGAACTTTACCATACATTGAATTGAACAGCGG............................................................................................................................ | 33 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................CATACATTGAATTGAACAGCGGAAAATA...................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................TGGAGTCTCGGGGGAACTGTAGGG.......................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................ATTGAACAGCGGAAAATATGTATGAGTTT........................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................GGCGGCGAATCTggac................................................................................... | 16 | ggac | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTTTTGGTCGTCTTTGCAG.................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................................................................................................................................................ATACATTGAATTGAACAGCG............................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................ATATGTATGAGTTTCAGCCTGTGGCGGg............................................................................................. | 28 | g | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TCTCTTTTGGTCGTCTTTGCAG.................................................. | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................GGCGGCGAATCTgga.................................................................................... | 15 | gga | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................GTTCAGCTCTGGAGcccg......................................................................................................................................................................... | 18 | cccg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGCAGACCCTGT........................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................ACCGCTCTGAAAGGGATCTGCAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................CTGGAGTCTCGGGGGAACTGT.............................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTTTTGGTCGTCTTTGCAG.................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................GTGGACGCTTTGTTGATGGTAGCTTGGCAGAAA...................................................................................................................................................................................................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................AAATAATAGTCCCCgaat........................................................................................................................................................................................................................................................................................................................................................ | 18 | gaat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................................................................................CTGGGCCCAACGAAAAGCGCATACGGAAAAG............................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GTTGATGGTAGCTTGGCAGAAAGGCACATG.............................................................................................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................TGAACAGCGGAAAATATGTATGAG.............................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................GAGTCTCGGGGGAACTGTAGGGAA........................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................CTTTTGGTCGTCTTTGCAG.................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................CATTGAATTGAACAGCGGA........................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................GTAAGAGGCTTGTGGTTTGGC..................................................................................................................................................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................GAACTGTAGGGAACTTTAC.................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................GTATGAGTTTCAGCCTGTG.................................................................................................. | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................ATTGAACAGCGGAAAATATGTATGAG.............................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................CTGAAAGGGATCTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................ | 17 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................TCCTCTCTCTCTTTTGGTCGTCTTTGCAG.................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................GTATGAGTTTCAGCCTGTGG................................................................................................. | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................TGAACAGCGGAAAATATGTATGAGTTTCAG........................................................................................................ | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TCTGGGCCCAACGAAAAGCGCATACGG.................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................GTAGGGAACTTTACC................................................................................................................................................. | 15 | 4 | 0.25 | 0.25 | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................AAGGGATCTGCAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................... | 15 | 17 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - |
| ..............................................................................................................................................................................ATTTCAGCAGTCTGG............................................................................................................................................................................................................................................................... | 15 | 14 | 0.07 | 0.07 | - | - | - | 0.07 | - | - | - | - | - | - | - | - | - |
| ...................................AAGGGATCTGCAGAGctc....................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | ctc | 0.06 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | 0.06 |
| GGAATGCAATTTCGGCGCCAGCTCCACCGCTCTGAAAGGGATCTGCAGAGGTAAGAGGCTTGTGGTTTGGCCCCTTTAAAAAAAATAATAGTCCCCATAGTCCAGAAGTTTAGTAATTTTGAGACCATGTATGGTGGACGCTTTGTTGATGGTAGCTTGGCAGAAAGGCACATGATTTCAGCAGTCTGGAATGCAATTCAGAGTGTCTGGGCCCAACGAAAAGCGCATACGGAAAAGTGATTCCTGACTAACTTATTGTTCAGCTCTGGAGTCTCGGGGGAACTGTAGGGAACTTTACCATACATTGAATTGAACAGCGGAAAATATGTATGAGTTTCAGCCTGTGGCGGCGAATCTTAACCTTCTCCTCTCTCTCTTTTGGTCGTCTTTGCAGCTCAGTCAGAAGGCAGACCCTGTGAATATAACTCCAGAATCTACCAAAAC ..........................................................................................................................................................................................................................................................................................(((((((((.....((((..((......))...((.(((.((...((.((((.(((.(((......)))))).)))))).)).))).))........))))..))))))))).................................................. ..........................................................................................................................................................................................................................................................................................283............................................................................................................394................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) |
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| ............................................................................................CCCCATAGTCCAGAAGTT.............................................................................................................................................................................................................................................................................................................................................. | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |