| Gene: Sec24b | ID: uc008rit.1_intron_3_0_chr3_129691919_r.5p | SPECIES: mm9 |
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(1) OTHER.ip |
(3) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(13) TESTES |
| TGAAAATGATTCATCCCAACTTATACAGGATAGACAGGCTGACAGACGAGGTGTGTACGTGAGCGAGCACAGTTGATGCTTTTGTCTTGGTGTCACTCCTAACTTTGTAGGTTCGTTCTTCCATGCTCTTATCTGTGGAGATAAACATTCAAATAGGGACTTAGAGATCTAGGTACATGAGAGGACCTTCAGATGCCGTCAGCCTGTGGGAGGGAAGGAACTCAGCATGGGCTTACTTTTAATATTTGAT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
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| ..................................................GTGTGTACGTGAGCGAGCACAGTTGATGCTTTTGTCTTGGTGTCACTCCTAA.................................................................................................................................................... | 52 | 1 | 65.00 | 65.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TACAGGATAGACAGGCTGACAGACGAG........................................................................................................................................................................................................ | 27 | 1 | 6.00 | 6.00 | - | 2.00 | 1.00 | - | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - |
| .......................TACAGGATAGACAGGCTGACAGACGA......................................................................................................................................................................................................... | 26 | 1 | 5.00 | 5.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | 1.00 |
| .....................TATACAGGATAGACAGGCTGACAGACGA......................................................................................................................................................................................................... | 28 | 1 | 3.00 | 3.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .......................TACAGGATAGACAGGCTGACAGAaga......................................................................................................................................................................................................... | 26 | aga | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................ACAGGATAGACAGGCTGACAGA............................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................................CTAGGTACATGAGAGGACCT.............................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................ACAGGATAGACAGGCTGACAGACGAGGgc..................................................................................................................................................................................................... | 29 | gc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................TACAGGATAGACAGGCTGACAGACGAGt....................................................................................................................................................................................................... | 28 | t | 1.00 | 6.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................TACAGGATAGACAGGCTGACAGA............................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................ATACAGGATAGACAGGCTGACAGACGt......................................................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................ATACAGGATAGACAGGCTGACAGACGA......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................ACAGGATAGACAGGCTGACAGACGAGGg...................................................................................................................................................................................................... | 28 | g | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TAGACAGGCTGACAGACGAGGg...................................................................................................................................................................................................... | 22 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................TACAGGATAGACAGGCTGACAGACGtt........................................................................................................................................................................................................ | 27 | tt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................AACTTATACAGGATAGACAGGCTGAC............................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| TGAAAATGATTCATCCCAACTTATACAGGATAGACAGGCTGACAGACGAGGTGTGTACGTGAGCGAGCACAGTTGATGCTTTTGTCTTGGTGTCACTCCTAACTTTGTAGGTTCGTTCTTCCATGCTCTTATCTGTGGAGATAAACATTCAAATAGGGACTTAGAGATCTAGGTACATGAGAGGACCTTCAGATGCCGTCAGCCTGTGGGAGGGAAGGAACTCAGCATGGGCTTACTTTTAATATTTGAT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
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