(8)
OTHER.mut
(4)
PIWI.ip
(1)
PIWI.mut
(1)
TDRD1.ip
(28)
TESTES

Sense strand
TGTCCCTCCGCGCGCGCGCGCCGGGCTAGGCTGGAGACGCACGTGGCGCGGTGAGTGCGGCGGAGGGCGAGCGAGGGTGAGGGCACCCGCGGGGCGGGATGCGGTGGAGAGGCATGGGATGCGGTGGCGAGCCACGGGTCGTGGGGCTGGGGCGAAGACACCGCTCTCTCTGCGCTCGCCACTTGGCTGTGTGGGCGAGTGGCAGGGCGGCGTTTACTGCTGTCCCCTTCTTGGTGGCCTGAGCGAGGCGGAGGGGACTTAGATAAATGATCGACCCGCGGTGACCGGGAGGAGCGGCCCGTCTATTTCGCCAGGCCGGAGAGAGCATGTCTTTCCGAGGCGGAGGTCGCGGAGGCTTTAATCG


Size Perfect hit Total Norm Perfect Norm SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
..........................TAGGCTGGAGACGCACGTGGCGCGGcc....................................................................................................................................................................................................................................................................................................................... 27 cc 8.00 4.00 2.00 - 3.00 3.00 - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................CTATTTCGCCAGGCCGGAG........................................... 19 1 5.00 5.00 - 5.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................TGGTGGCCTGAGCGAGGCGGAGGGG............................................................................................................ 25 1 4.00 4.00 - 3.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................TAGGCTGGAGACGCACGTGGCGCGG......................................................................................................................................................................................................................................................................................................................... 25 1 4.00 4.00 - - - 1.00 - 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - -
..............................................CGCGGTGAGTGCGGCGGAGG.......................................................................................................................................................................................................................................................................................................... 20 1 3.00 3.00 - - - - - - - - - 3.00 - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................ATCGACCCGCGGTGACCGGGAGGAGC..................................................................... 26 1 2.00 2.00 - - - - - - - - - - - - - - - - - - 1.00 - - - 1.00 - - - - -
................................................................................................................................................................................................................................................................ACTTAGATAAATGATCGACCCGCGGTG................................................................................. 27 1 2.00 2.00 - - - 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..........................TAGGCTGGAGACGCACGTGGCGCGGTt....................................................................................................................................................................................................................................................................................................................... 27 t 2.00 0.00 - - - 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................GGCGGAGGTCGCGGAGGCTgccg... 23 gccg 2.00 0.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................................................................AGGCGGAGGTCGCGGtcg......... 18 tcg 2.00 0.00 - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
......................................................................GCGAGGGTGAGGGCACCCGC.................................................................................................................................................................................................................................................................................. 20 1 2.00 2.00 - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................CTTAGATAAATGATCGACCCGCGGTG................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
.....................................................................................................................................................................................................................................................................GATAAATGATCGACCCGCGGTGACCGGt........................................................................... 28 t 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
........................................................................................................................................................................................................................................GGTGGCCTGAGCGAGGCGGAGGGGACTTA....................................................................................................... 29 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...........................AGGCTGGAGACGCACGTGGCG............................................................................................................................................................................................................................................................................................................................ 21 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................CCGGAGAGAGCATGTCT................................ 17 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................GAGTGCGGCGGAGGGCGA...................................................................................................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.....................................................................................................................................................................................................AGTGGCAGGGCGttt........................................................................................................................................................ 15 ttt 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................CACGGGTCGTGGGGCTGGGGCGA................................................................................................................................................................................................................. 23 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................TTCCGAGGCGGAGGTCGCGGAG.......... 22 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................CTAGGCTGGAGACGCACGTGGCGCGa......................................................................................................................................................................................................................................................................................................................... 26 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.................GCGCCGGGCTAGGCTGGAGACG..................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
..........................TAGGCTGGAGACGCACGTGGCGCGGTG....................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..........................TAGGCTGGAGACGCACGTGGCGCGGccg...................................................................................................................................................................................................................................................................................................................... 28 ccg 1.00 4.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................TGGCTGTGTGGGCGAGTGGCAGGGCGGCGT....................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
....................CCGGGCTAGGCTGGAGACGCACG................................................................................................................................................................................................................................................................................................................................. 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................GGTGGCGAGCCACGagg................................................................................................................................................................................................................................. 17 agg 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...........................AGGCTGGAGACGCACGTGG.............................................................................................................................................................................................................................................................................................................................. 19 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................GCCGGGCTAGGCTGGAGAC...................................................................................................................................................................................................................................................................................................................................... 19 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
.........................................................................................CGGGGCGGGATGCGGTGGAG............................................................................................................................................................................................................................................................... 20 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
....................................................GAGTGCGGCGGAGGGCGAGCGA.................................................................................................................................................................................................................................................................................................. 22 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.....................CGGGCTAGGCTGGAGACGCACG................................................................................................................................................................................................................................................................................................................................. 22 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.....................................................AGTGCGGCGGAGGGCGAGCG................................................................................................................................................................................................................................................................................................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................GACTTAGATAAATGATCGAC......................................................................................... 20 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............GCGCGCCGGGCTAGGCTGGAGA....................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................GGCTAGGCTGGAGACGCACGTGGCGCG.......................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..........................TAGGCTGGAGACGCACGTGGCGCGGc........................................................................................................................................................................................................................................................................................................................ 26 c 1.00 4.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................CCTGAGCGAGGCGGAGGGGACTTAGA..................................................................................................... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................GCTAGGCTGGAGACGCACGTG............................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................TCTATTTCGCCAGGCCGGAGAGAGCAT.................................... 27 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................ACTTAGATAAATGATCGACCCGCGGTGt................................................................................ 28 t 1.00 2.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................AGATAAATGATCGACCCGCGGTGA................................................................................ 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...................................................................................................................................................................................................................................................................TAGATAAATGATCGACCCGCGGTGACC.............................................................................. 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................ACGGGTCGTGGGGCTGGGGCGAAGAC............................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
......................GGGCTAGGCTGGAGACGCACGTGGCGCG.......................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................GCTAGGCTGGAGACGCACGTGGCGCGG......................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...................GCCGGGCTAGGCTGGAGACG..................................................................................................................................................................................................................................................................................................................................... 20 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................ACTTAGATAAATGATCGACCCGCGGTGAC............................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
......................GGGCTAGGCTGGAGACGCACG................................................................................................................................................................................................................................................................................................................................. 21 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...................GCCGGGCTAGGCTGGAGACGCACG................................................................................................................................................................................................................................................................................................................................. 24 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................CGGAGGTCGCGGAGGCTT...... 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................GCTAGGCTGGAGACGCACGTGGCGCG.......................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................AGGGTGAGGGCACCCGCG................................................................................................................................................................................................................................................................................. 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................GACTTAGATAAATGATCGACCCGCGGTG................................................................................. 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
TGTCCCTCCGCGCGCGCGCGCCGGGCTAGGCTGGAGACGCACGTGGCGCGGTGAGTGCGGCGGAGGGCGAGCGAGGGTGAGGGCACCCGCGGGGCGGGATGCGGTGGAGAGGCATGGGATGCGGTGGCGAGCCACGGGTCGTGGGGCTGGGGCGAAGACACCGCTCTCTCTGCGCTCGCCACTTGGCTGTGTGGGCGAGTGGCAGGGCGGCGTTTACTGCTGTCCCCTTCTTGGTGGCCTGAGCGAGGCGGAGGGGACTTAGATAAATGATCGACCCGCGGTGACCGGGAGGAGCGGCCCGTCTATTTCGCCAGGCCGGAGAGAGCATGTCTTTCCGAGGCGGAGGTCGCGGAGGCTTTAATCG


Size Perfect hit Total Norm Perfect Norm SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
.....................................................................................................................................................................................................................................................................................................................GCCAGGCCGGAGAGAGCAT.................................... 19 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........................................................................................CGGGATGCGGTGtccg.................................................................................................................................................................................................................................................................. 16 tccg 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................GGGAGGAGCGGCCCGTCTATTTCGCCA................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................TTTACTGCTGTCCCCTTCTTGGTGGCC............................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................CCCGTCTATTTCGCCAGGCCG.............................................. 21 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................GCGGCGTTTACTGCTGTCCCCTTCTTG................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -