| Gene: Stxbp3a | ID: uc008qzr.2_intron_9_0_chr3_108608252_r.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.ip |
(2) PIWI.mut |
(9) TESTES |
| TTTCAGGCAATGGCATATGATCTACTACCAATTGAGAATGATACATACAAGCAAGTATAAACTGAAGGGCTTATAGAGGGCGTGTAGACAGACTATGAAATGACTGACAATGGGGGCAGAATCTGGAAGATCTGGAGCCTGCTTATTCAGAGACCTTCCCTCTCTCTCACTCCCGTAACTGTAACCCTGACAGAAGCTAACGGGCAGCTTGCTTCAGAGCTTTGAAGTGGACTGGTTTCCTTAACTATCC ...............................................................(((((((((.....))))..((((.....)))).......((((......((((((..((..((...))..))..))))))..))))...)))))............................................................................................ ..................................................51............................................................................................................161....................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................AAGTATAAACTGAAGGGCTTATAGAGGGCGTGTAGACAGACTATGAAATGAC.................................................................................................................................................. | 52 | 2 | 20.50 | 20.50 | 20.50 | - | - | - | - | - | - | - | - |
| ........................................................................ATAGAGGGCGTGTAGACAGACT............................................................................................................................................................ | 22 | 2 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TTCAGAGCTTTGAAGagag................... | 19 | agag | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - |
| ........................................ATACATACAAGCAAcagc................................................................................................................................................................................................ | 18 | cagc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - |
| ........................................ATACATACAAGCAAccgt................................................................................................................................................................................................ | 18 | ccgt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................TGCTTATTCAGAGACCccgt........................................................................................... | 20 | ccgt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - |
| .TTCAGGCAATGGCATATGATCTACTA............................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - |
| ..................................................GCAAGTATAAACTGAAGGGCTTATAGAGGGCGT....................................................................................................................................................................... | 33 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 |
| ......................TACTACCAATTGAGAATGATACATACAAG....................................................................................................................................................................................................... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - |
| TTTCAGGCAATGGCATATGATCTACTACCAATTGAGAATGATACATACAAGCAAGTATAAACTGAAGGGCTTATAGAGGGCGTGTAGACAGACTATGAAATGACTGACAATGGGGGCAGAATCTGGAAGATCTGGAGCCTGCTTATTCAGAGACCTTCCCTCTCTCTCACTCCCGTAACTGTAACCCTGACAGAAGCTAACGGGCAGCTTGCTTCAGAGCTTTGAAGTGGACTGGTTTCCTTAACTATCC ...............................................................(((((((((.....))))..((((.....)))).......((((......((((((..((..((...))..))..))))))..))))...)))))............................................................................................ ..................................................51............................................................................................................161....................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) |
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| ......................ACCAATTGAGActag..................................................................................................................................................................................................................... | 15 | ctag | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - |