| Gene: Sort1 | ID: uc008qyr.1_intron_11_0_chr3_108147875_f.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.ip |
(7) TESTES |
| AATGGCCCCACTTTCCGAGCCCAATGCTGTGGGCATAGTCATCGCTCACGGTAAGGAGCCCTCTCTCTCACAATTGTGGACTGAGCCACCAAGCACAGAGAGACAGCGCTGCCTTTGGGCTTGTGTATGCATACATGCACACACACACACACACACACACACACACACACACCCCACAAGCTCACCCCACATAGTAGGTAGCTGCTCTGTTTTGTTTCTGTGTCCTTTCTGTTGCTGTGATAAACCACTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR037903(GSM510439) testes_rep4. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAGGAGCCCTCTCTCTCACAATTGTGGACTGAGCCACCAAGCACAGAGAG.................................................................................................................................................... | 52 | 1 | 41.00 | 41.00 | 41.00 | - | - | - | - | - | - |
| AATGGCCCCACTTTCCGAGCCCAATGCTGTGGGCATAGTCATCGCTCACGGTAAGGAGCCCTCTCTCTCACAATTGTGGACTGAGCCACCAAGCACAGAGAGACAGCGCTGCCTTTGGGCTTGTGTATGCATACATGCACACACACACACACACACACACACACACACACACCCCACAAGCTCACCCCACATAGTAGGTAGCTGCTCTGTTTTGTTTCTGTGTCCTTTCTGTTGCTGTGATAAACCACTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR037903(GSM510439) testes_rep4. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................................TCCTTTCTGTTGCTGTGATAta........ | 22 | ta | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - |
| ...........................................................................................................................................................................................................................TCCTTTCTGTTGCTGTGATAttt........ | 23 | ttt | 2.00 | 0.00 | - | 1.00 | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................................................................TCCTTTCTGTTGCTGTGAtttt.......... | 22 | tttt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................................CCTTTCTGTTGCTGTGtatt........... | 20 | tatt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................................GTGTCCTTTCTGTTGCTGTGATAtagg........ | 27 | tagg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................................................................................GTCCTTTCTGTTGCTGTGATA........ | 21 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | 0.14 |
| ...........................................................................................................................................................................................................................GTGTCCTTTCTGTTGCTGT............ | 19 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | 0.12 |